| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
Click here to switch to the map view.
The map label for this gene is cutR [H]
Identifier: 145294590
GI number: 145294590
Start: 600802
End: 601476
Strand: Reverse
Name: cutR [H]
Synonym: cgR_0541
Alternate gene names: 145294590
Gene position: 601476-600802 (Counterclockwise)
Preceding gene: 145294594
Following gene: 145294589
Centisome position: 18.15
GC content: 65.63
Gene sequence:
>675_bases ATGACAATCCGCGTTCTCGTCGTCGACGACGAAAGCTACCTCGCCGACGCCATTTGCACTGCGCTGAACAGCGCACACAT GCAGGCCACTACGGTCTACGACGGTGCCACCGCGCGCTCGTCGATCGACGATATCCGGCCCGACGTCGTCGTCCTGGACC GCGACCTTCCGGGCATCCACGGCGACGACATCTGCCGCTGGGTGGTCGATACCCACCCGGCGACGAGGGTGATCATGCTG ACCGCCTCGGGGGCGCTCGACGACCGCCTGGCTGGGTTCGACCTCGGCGCGGATGATTACCTGCCCAAGCCCTTCGAAGT CTCGGAGCTCATCGCGCGGGTTAATGCGCTGGCCAAGCGAAACCTGCCGGTACGCGGCGAAGTCTACCGGTGTGGCGACG TGCGGCTGGACACCTTCCGCCGTGAGGTCACCCGGGGTGGAGTGGCGGTGCCCTTGAGCCCGAAGGAGTTTGCCGTGCTA GAGGTCCTCATGGAGGCAGCCGGTGGGGTGTTTTCCGCCGAGGATCTGCTCGCGGAGGCGTGGGACGAGAATGCTGATCC CTTCACGAATTCCCCGCGCGTGACGGTCTCCCATCTGCGCAAGAAGCTGGGCGAGCCGCGGATCGTGCATACCGTGGCAG GTGCCGGTTACTATGTGGCGGAGGTGCCGCGATGA
Upstream 100 bases:
>100_bases GATACCAACGTTTCGGTTCTGCATAGCTGGGACGGTACGCAGGCCGATGTTGCGGGGACGTTAACGCGGGCACAACACCC GTGCCGTTACGATCGGTGCC
Downstream 100 bases:
>100_bases AGTTGAGTTTGCGGGCACGGATCACCGTGGTGTTCTTGGGCACCGTCCTGGGCGTGGGGTTGGCGCTGATTGGGCTGGTG TACGCCTATTTGAAGCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Defective melC1 suppressor protein [H]
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTIRVLVVDDESYLADAICTALNSAHMQATTVYDGATARSSIDDIRPDVVVLDRDLPGIHGDDICRWVVDTHPATRVIML TASGALDDRLAGFDLGADDYLPKPFEVSELIARVNALAKRNLPVRGEVYRCGDVRLDTFRREVTRGGVAVPLSPKEFAVL EVLMEAAGGVFSAEDLLAEAWDENADPFTNSPRVTVSHLRKKLGEPRIVHTVAGAGYYVAEVPR
Sequences:
>Translated_224_residues MTIRVLVVDDESYLADAICTALNSAHMQATTVYDGATARSSIDDIRPDVVVLDRDLPGIHGDDICRWVVDTHPATRVIML TASGALDDRLAGFDLGADDYLPKPFEVSELIARVNALAKRNLPVRGEVYRCGDVRLDTFRREVTRGGVAVPLSPKEFAVL EVLMEAAGGVFSAEDLLAEAWDENADPFTNSPRVTVSHLRKKLGEPRIVHTVAGAGYYVAEVPR >Mature_223_residues TIRVLVVDDESYLADAICTALNSAHMQATTVYDGATARSSIDDIRPDVVVLDRDLPGIHGDDICRWVVDTHPATRVIMLT ASGALDDRLAGFDLGADDYLPKPFEVSELIARVNALAKRNLPVRGEVYRCGDVRLDTFRREVTRGGVAVPLSPKEFAVLE VLMEAAGGVFSAEDLLAEAWDENADPFTNSPRVTVSHLRKKLGEPRIVHTVAGAGYYVAEVPR
Specific function: Member of the two-component regulatory system CutS/CutR, involved in the regulation of copper metabolism. CutR suppresses a defective melC1 gene, encoding a putative copper-transfer gene, probably by altering copper metabolism [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=38.2882882882883, Blast_Score=130, Evalue=5e-32, Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=34.2222222222222, Blast_Score=130, Evalue=8e-32, Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=35.4545454545455, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=34.375, Blast_Score=116, Evalue=1e-27, Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=31.1111111111111, Blast_Score=107, Evalue=5e-25, Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=33.6283185840708, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=31.0502283105023, Blast_Score=104, Evalue=4e-24, Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=32.8888888888889, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI1788394, Length=222, Percent_Identity=31.0810810810811, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=27.5229357798165, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=31.7391304347826, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=26.3392857142857, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790299, Length=111, Percent_Identity=36.036036036036, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=24.7826086956522, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 24416; Mature: 24285
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRVLVVDDESYLADAICTALNSAHMQATTVYDGATARSSIDDIRPDVVVLDRDLPGIH CEEEEEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCC GDDICRWVVDTHPATRVIMLTASGALDDRLAGFDLGADDYLPKPFEVSELIARVNALAKR CCHHHHHEECCCCCEEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC NLPVRGEVYRCGDVRLDTFRREVTRGGVAVPLSPKEFAVLEVLMEAAGGVFSAEDLLAEA CCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHH WDENADPFTNSPRVTVSHLRKKLGEPRIVHTVAGAGYYVAEVPR HCCCCCCCCCCCCEEHHHHHHHHCCCEEEEEECCCCEEEEECCC >Mature Secondary Structure TIRVLVVDDESYLADAICTALNSAHMQATTVYDGATARSSIDDIRPDVVVLDRDLPGIH EEEEEEECCCHHHHHHHHHHHHHHCEEEEEEECCCCCCCCHHHCCCCEEEEECCCCCCC GDDICRWVVDTHPATRVIMLTASGALDDRLAGFDLGADDYLPKPFEVSELIARVNALAKR CCHHHHHEECCCCCEEEEEEEECCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC NLPVRGEVYRCGDVRLDTFRREVTRGGVAVPLSPKEFAVLEVLMEAAGGVFSAEDLLAEA CCCCCCCEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHH WDENADPFTNSPRVTVSHLRKKLGEPRIVHTVAGAGYYVAEVPR HCCCCCCCCCCCCEEHHHHHHHHCCCEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]