Click here to switch to the map view.

The map label for this gene is yqjF [C]

Identifier: 145294573

GI number: 145294573

Start: 583945

End: 584358

Strand: Reverse

Name: yqjF [C]

Synonym: cgR_0524

Alternate gene names: 145294573

Gene position: 584358-583945 (Counterclockwise)

Preceding gene: 145294574

Following gene: 145294572

Centisome position: 17.63

GC content: 56.76

Gene sequence:

>414_bases
GTGACCATGTCAACTACCAGGGAAATTGCATTCCTCATCGCACGTATCCTCTTGGGCGTCATCCTCATCGCCCACGGCTG
GGACAAGTTCGCCATCACAGGACTTGAAGGCGTCACCGGCTTCTTCGATTCACTCGGCATCCCAGCAGCCGGCATCGCCG
CAATAGCTGCTGCAGTCGTCGAGCTCCTAGGAGGAATCCTTATCATCCTAGGAGTATTTACCCGCATCGTTGCCGCCTTC
GTTGCCATAGACATGCTCTTCGCAGCACTGTTTGCGCACGTCTCCTCCGGCATCTTTGTCACCAACAATGGTTGGGAATT
GACCGGCGCAATCGGCGCTGGCGCACTGCTTCTCATCGCAGTTGGCGCAGGTGCATGGAGCATCGACGGGGTTCTGGCAA
AACGCAAGGCCTAA

Upstream 100 bases:

>100_bases
ACCTCGGGAAATAGACCGTTAATAGCTGGTCTTTACATTTGACAGAAACCTCCGACAAAACCCCAATAGTTGACACGGAA
ACCAATTCATTCTAGCTTTA

Downstream 100 bases:

>100_bases
ACCTAGCGCCACAACTCCGAATTCTGAACCATCGGCACTAGAATCTCGAAATATGAATACTCGCGTCCTCGAAGCACTAC
CTGTTGATCTTGCAGATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTMSTTREIAFLIARILLGVILIAHGWDKFAITGLEGVTGFFDSLGIPAAGIAAIAAAVVELLGGILIILGVFTRIVAAF
VAIDMLFAALFAHVSSGIFVTNNGWELTGAIGAGALLLIAVGAGAWSIDGVLAKRKA

Sequences:

>Translated_137_residues
MTMSTTREIAFLIARILLGVILIAHGWDKFAITGLEGVTGFFDSLGIPAAGIAAIAAAVVELLGGILIILGVFTRIVAAF
VAIDMLFAALFAHVSSGIFVTNNGWELTGAIGAGALLLIAVGAGAWSIDGVLAKRKA
>Mature_136_residues
TMSTTREIAFLIARILLGVILIAHGWDKFAITGLEGVTGFFDSLGIPAAGIAAIAAAVVELLGGILIILGVFTRIVAAFV
AIDMLFAALFAHVSSGIFVTNNGWELTGAIGAGALLLIAVGAGAWSIDGVLAKRKA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082210, Length=139, Percent_Identity=35.2517985611511, Blast_Score=63, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13980; Mature: 13849

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMSTTREIAFLIARILLGVILIAHGWDKFAITGLEGVTGFFDSLGIPAAGIAAIAAAVV
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHH
ELLGGILIILGVFTRIVAAFVAIDMLFAALFAHVSSGIFVTNNGWELTGAIGAGALLLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEHHHHHHHHHHH
VGAGAWSIDGVLAKRKA
HCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TMSTTREIAFLIARILLGVILIAHGWDKFAITGLEGVTGFFDSLGIPAAGIAAIAAAVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHEECCHHHHHHHHHHCCCCHHHHHHHHHHHH
ELLGGILIILGVFTRIVAAFVAIDMLFAALFAHVSSGIFVTNNGWELTGAIGAGALLLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEEHHHHHHHHHHH
VGAGAWSIDGVLAKRKA
HCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA