| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is purR [H]
Identifier: 145294157
GI number: 145294157
Start: 134356
End: 135357
Strand: Reverse
Name: purR [H]
Synonym: cgR_0115
Alternate gene names: 145294157
Gene position: 135357-134356 (Counterclockwise)
Preceding gene: 145294160
Following gene: 145294156
Centisome position: 4.08
GC content: 50.7
Gene sequence:
>1002_bases GTGCCGACCAGCAGAGATGTGGCACGGGCTGCCGGAGTGTCGCAGGCCACAGTGTCTCGGGCGTTAAATCGCCCAGAAAC TGTGTCGCAGAAAACCCGTGAGCGGGTTCAAGCTGCAGTCCAAACTCTCGGATACCACCCTCATTCCGGTGCTATCGCAA TGAAAACTCAGCGCACCAAAACAATCGGAGTCGTTGTCTCTGAGTTATCCAACCCCTTTTTCCAAGAGATCTTCGAAACC CTCAGTCAGGAATTTGCCAAGGCGGGATCTCGGGTCATCGTGTGGGATTCAGCTCTACATGAACGCGATGCTATCCGGGC ACTCCAGGAAAGAAGCGTTGACGGGGTGATTATGTCTGCTTGGGATGAAGACGCCCAAGAAATGCGAGATATCCTTGAGA CAGGACTTCCCGTCGTTTTGCTCAACCGCACTGCCCCTAAGGGTTCTTTCGATTCGGTTACTAGCGATAATCACAACGGT GGCCAGTTGGTGGCAGATTATCTTCATCAGCATGGGAAACACCATCTAGTGTTCATTCAGGGCAACCCGCACACCAGCAC TTCTATGGAACGATTAAACGGTTTTCGAGCAGGCCTACACGCACTAAATCAACCATCACCTACTGTGCTCAACGGTGAAT TCTCCTTTGAAAAATCATTTGCTGTTACCCGTGATTTCCTCGATCAACATGGTGCCCCCGATGCCTTTTTCTGCGCCAAT GATTATATGGCTTTCGGTGTTCTCAATGCCGTCAAAGCTGCCGGTATGTCCGTTCCGGAAGATGTCTGGGTTATCGGTTA CGACAACGTAAGCCAATCCGATTGGCCCATCTTGGATCTCACCACAGTCCGTCAAGGCAGCCGTCAGATGGCGCAATTAG GTGCCCAGAAACTTCTAAACCGAATAGAAAATCCCACCACCCCAGCCGTCAAAACAATTCTTCCGGTCCAACTAGAAATC CGTGGCTCCAGCGAAAATGCTCCATTTAATCATGAAAACTAA
Upstream 100 bases:
>100_bases AAGGGGTTTTGTTACCCCCGGTGCGATGACCCCAGAAGAGGGCAGCTGTTCATTAGTTTCGATAAGCTCAGTAGTCCATA CGTTGAGAGAGGAAAAGATA
Downstream 100 bases:
>100_bases CTGTTTTAGGTCATCCTGGGGCGATTTATTACCCCACAATGCGGCCCAAATGAAGAAGAGGCCTATAGGCGAATATATGT TCTGTAGACCTCTTCAACTT
Product: hypothetical protein
Products: NA
Alternate protein names: Pur regulon repressor; Purine nucleotide synthesis repressor [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPTSRDVARAAGVSQATVSRALNRPETVSQKTRERVQAAVQTLGYHPHSGAIAMKTQRTKTIGVVVSELSNPFFQEIFET LSQEFAKAGSRVIVWDSALHERDAIRALQERSVDGVIMSAWDEDAQEMRDILETGLPVVLLNRTAPKGSFDSVTSDNHNG GQLVADYLHQHGKHHLVFIQGNPHTSTSMERLNGFRAGLHALNQPSPTVLNGEFSFEKSFAVTRDFLDQHGAPDAFFCAN DYMAFGVLNAVKAAGMSVPEDVWVIGYDNVSQSDWPILDLTTVRQGSRQMAQLGAQKLLNRIENPTTPAVKTILPVQLEI RGSSENAPFNHEN
Sequences:
>Translated_333_residues MPTSRDVARAAGVSQATVSRALNRPETVSQKTRERVQAAVQTLGYHPHSGAIAMKTQRTKTIGVVVSELSNPFFQEIFET LSQEFAKAGSRVIVWDSALHERDAIRALQERSVDGVIMSAWDEDAQEMRDILETGLPVVLLNRTAPKGSFDSVTSDNHNG GQLVADYLHQHGKHHLVFIQGNPHTSTSMERLNGFRAGLHALNQPSPTVLNGEFSFEKSFAVTRDFLDQHGAPDAFFCAN DYMAFGVLNAVKAAGMSVPEDVWVIGYDNVSQSDWPILDLTTVRQGSRQMAQLGAQKLLNRIENPTTPAVKTILPVQLEI RGSSENAPFNHEN >Mature_332_residues PTSRDVARAAGVSQATVSRALNRPETVSQKTRERVQAAVQTLGYHPHSGAIAMKTQRTKTIGVVVSELSNPFFQEIFETL SQEFAKAGSRVIVWDSALHERDAIRALQERSVDGVIMSAWDEDAQEMRDILETGLPVVLLNRTAPKGSFDSVTSDNHNGG QLVADYLHQHGKHHLVFIQGNPHTSTSMERLNGFRAGLHALNQPSPTVLNGEFSFEKSFAVTRDFLDQHGAPDAFFCAND YMAFGVLNAVKAAGMSVPEDVWVIGYDNVSQSDWPILDLTTVRQGSRQMAQLGAQKLLNRIENPTTPAVKTILPVQLEIR GSSENAPFNHEN
Specific function: Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepre
COG id: COG1609
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1790194, Length=332, Percent_Identity=31.3253012048193, Blast_Score=163, Evalue=1e-41, Organism=Escherichia coli, GI1790369, Length=338, Percent_Identity=30.7692307692308, Blast_Score=160, Evalue=9e-41, Organism=Escherichia coli, GI1787948, Length=338, Percent_Identity=30.1775147928994, Blast_Score=153, Evalue=1e-38, Organism=Escherichia coli, GI1788474, Length=304, Percent_Identity=30.9210526315789, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789068, Length=300, Percent_Identity=30, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789202, Length=340, Percent_Identity=28.5294117647059, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1786540, Length=334, Percent_Identity=29.940119760479, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787580, Length=281, Percent_Identity=25.6227758007117, Blast_Score=111, Evalue=5e-26, Organism=Escherichia coli, GI1787906, Length=333, Percent_Identity=26.1261261261261, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI48994940, Length=308, Percent_Identity=25, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1786268, Length=320, Percent_Identity=23.75, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1790192, Length=245, Percent_Identity=29.7959183673469, Blast_Score=95, Evalue=7e-21, Organism=Escherichia coli, GI1790715, Length=307, Percent_Identity=23.1270358306189, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790689, Length=249, Percent_Identity=28.5140562248996, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789456, Length=342, Percent_Identity=23.6842105263158, Blast_Score=82, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36613; Mature: 36482
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSRDVARAAGVSQATVSRALNRPETVSQKTRERVQAAVQTLGYHPHSGAIAMKTQRTK CCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH TIGVVVSELSNPFFQEIFETLSQEFAKAGSRVIVWDSALHERDAIRALQERSVDGVIMSA HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEC WDEDAQEMRDILETGLPVVLLNRTAPKGSFDSVTSDNHNGGQLVADYLHQHGKHHLVFIQ CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE GNPHTSTSMERLNGFRAGLHALNQPSPTVLNGEFSFEKSFAVTRDFLDQHGAPDAFFCAN CCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEECC DYMAFGVLNAVKAAGMSVPEDVWVIGYDNVSQSDWPILDLTTVRQGSRQMAQLGAQKLLN HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH RIENPTTPAVKTILPVQLEIRGSSENAPFNHEN HHCCCCCCHHHHEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure PTSRDVARAAGVSQATVSRALNRPETVSQKTRERVQAAVQTLGYHPHSGAIAMKTQRTK CCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHH TIGVVVSELSNPFFQEIFETLSQEFAKAGSRVIVWDSALHERDAIRALQERSVDGVIMSA HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCCCEEEEC WDEDAQEMRDILETGLPVVLLNRTAPKGSFDSVTSDNHNGGQLVADYLHQHGKHHLVFIQ CCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEE GNPHTSTSMERLNGFRAGLHALNQPSPTVLNGEFSFEKSFAVTRDFLDQHGAPDAFFCAN CCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHCCCCCEEEECC DYMAFGVLNAVKAAGMSVPEDVWVIGYDNVSQSDWPILDLTTVRQGSRQMAQLGAQKLLN HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHH RIENPTTPAVKTILPVQLEIRGSSENAPFNHEN HHCCCCCCHHHHEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA