| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is amn [H]
Identifier: 145294155
GI number: 145294155
Start: 130722
End: 132131
Strand: Direct
Name: amn [H]
Synonym: cgR_0113
Alternate gene names: 145294155
Gene position: 130722-132131 (Clockwise)
Preceding gene: 145294151
Following gene: 229232842
Centisome position: 3.94
GC content: 55.89
Gene sequence:
>1410_bases ATGGAAGCAACAACGATCGATGACGCAATCGCGAAGCTCATTGACATCTACGACACCTCGACCAAACTGGCCAAAGAAAC CCTAGACAACGAGGACTACGCAGCCTATGCAGACGTTGTCTACCCCAAACTCACCGTAGACGTGCTGGAATGGAAACCCA TCGACCGTACCGAACCTTTCGGCTACGTTGATCGTGCAGGACGTTACTCCGCCATTTTGTCCAAACCACGCGTGATTGAG CGTTACCTCCGCGAACAACTCGAGCGTCTCACCAGCAATTATCCCTGCAAGATTTACGTATCTGAGTCAGATATCCGCAT CCCACCGGAGTACATTCGCGGCGCACCTTCCGCTACCGAAGCTCGCCGTGCTGGTGATGTTGCAGATATCATCCCACGCC CCACCCTGGATGAAGTCCACGACGCAATTATCGACGGCGACTGGCACGCCTTCAACGGCCCCGAACTCCCGCTTTTCCAC TTCGGGCCGCAACGCTTCGACATCGCCTGCGCCCGCATCGAGCACTACACCGGCATCAACGTGGAACACGTGCAGAAGTA CATTCTGTTCACCAACTACGCCATGCACACCACCGAGTTCGTGCATTTTGCCATGTCCGAACTCACCTCGGAAGACTCCC GCTACGTGGGTCTATCCTTGCCAAACGGGCAGGTAATTGACCGAGAGACCGCCACCAGCCTCGGAACGGAAACCCTTGAT CTGACTAGCCGTTTCCAAATGCCTCGTTACGATCTCATCACCGAAGCCGGTGACGGTATTACCATTATCAACATCGGTGT GGGCCCATCCAATGCAAAAACTATCACCGACTGCCTTGCTGTACTCCGCCCAGAAGCCTGGGTGATGATCGGCCACTGTG CTGGTATGGACGCCCGCATGCGCATCGGCGACCTCATCTTAGGCAACGCCTACCAGCGCGAAGACCACATTCTGGACAAA CGCATTTCCCTTGGCAACCCCATTCCTGCCATCCCAGAAATCCAAAAAGCACTCGAAGCCAGCGTTGATGAAATCTACGG ATCTGACAACAGCCTGATGCGCACCGGCACCGTCCTATCCACCGACGACCGAAACTGGGAATGGCACACCCCAGAAGACC TCTGGAACTGGCTCAAAGGATCCACCGCCGCAGCTGTCGACATGGAATCTTCCACCTTGGCCACCAACGGATATCGATAC CGCATTCCATACGGCACCCTGCTGAGCGTCTCTGACCTGCCACTACACGCAGTGCCGAAACTTCCCGCGCAAGCGCAGGC GTTTTACTCCAACTCCAAGGAAGCCCACGTCATGTGTGCTGTTCGTGCAATGGAATACCTGGCAGTAGATCCTGAACGGT TGCGTACCCGTAAACTGCGACGCACCCTCGGTGAGGTGCCGTTCCGTTAG
Upstream 100 bases:
>100_bases AACTTGGAAATTATCACGTGAGGATTCTTGCATACGCCTATAAAAGCACAGTTTTGAATCCACAGGGCATCAGGGCGTGC AGAAAGATAGTGTGGTGCGC
Downstream 100 bases:
>100_bases AAACTAAGTAGGAGTTGTTCGAAATTTCAAACAACTTCTGACAGTCCTGTCGCACTCGTGATTCATACTGTGTCCCAACA ACATTCACCGACATGAAAGG
Product: AMP nucleosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MEATTIDDAIAKLIDIYDTSTKLAKETLDNEDYAAYADVVYPKLTVDVLEWKPIDRTEPFGYVDRAGRYSAILSKPRVIE RYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFH FGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETATSLGTETLD LTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLILGNAYQREDHILDK RISLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLSTDDRNWEWHTPEDLWNWLKGSTAAAVDMESSTLATNGYRY RIPYGTLLSVSDLPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR
Sequences:
>Translated_469_residues MEATTIDDAIAKLIDIYDTSTKLAKETLDNEDYAAYADVVYPKLTVDVLEWKPIDRTEPFGYVDRAGRYSAILSKPRVIE RYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFH FGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETATSLGTETLD LTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLILGNAYQREDHILDK RISLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLSTDDRNWEWHTPEDLWNWLKGSTAAAVDMESSTLATNGYRY RIPYGTLLSVSDLPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR >Mature_469_residues MEATTIDDAIAKLIDIYDTSTKLAKETLDNEDYAAYADVVYPKLTVDVLEWKPIDRTEPFGYVDRAGRYSAILSKPRVIE RYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATEARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFH FGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETATSLGTETLD LTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLILGNAYQREDHILDK RISLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLSTDDRNWEWHTPEDLWNWLKGSTAAAVDMESSTLATNGYRY RIPYGTLLSVSDLPLHAVPKLPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR
Specific function: Involved in regulation of AMP concentrations [H]
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788293, Length=468, Percent_Identity=41.025641025641, Blast_Score=323, Evalue=1e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011271 - InterPro: IPR018953 - InterPro: IPR018017 - InterPro: IPR000845 [H]
Pfam domain/function: PF10423 AMNp_N; PF01048 PNP_UDP_1 [H]
EC number: =3.2.2.4 [H]
Molecular weight: Translated: 52791; Mature: 52791
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATTIDDAIAKLIDIYDTSTKLAKETLDNEDYAAYADVVYPKLTVDVLEWKPIDRTEPF CCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHCCCEEEEEEECCCCCCCCCC GYVDRAGRYSAILSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATE CCHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCHHH ARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFHFGPQRFDIACARIEHYTGIN HHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCC VEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETATSLGTETLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHHHHCCCCHHH LTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARM HHHHCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHH RIGDLILGNAYQREDHILDKRISLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLS HHHHEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEE TDDRNWEWHTPEDLWNWLKGSTAAAVDMESSTLATNGYRYRIPYGTLLSVSDLPLHAVPK CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEECCEEEECCCCCEEEECCCCCCCCCC LPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEATTIDDAIAKLIDIYDTSTKLAKETLDNEDYAAYADVVYPKLTVDVLEWKPIDRTEPF CCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEHHHHHCCCEEEEEEECCCCCCCCCC GYVDRAGRYSAILSKPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGAPSATE CCHHCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCHHH ARRAGDVADIIPRPTLDEVHDAIIDGDWHAFNGPELPLFHFGPQRFDIACARIEHYTGIN HHHCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCC VEHVQKYILFTNYAMHTTEFVHFAMSELTSEDSRYVGLSLPNGQVIDRETATSLGTETLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECCHHHHHCCCCHHH LTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARM HHHHCCCCCHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCHH RIGDLILGNAYQREDHILDKRISLGNPIPAIPEIQKALEASVDEIYGSDNSLMRTGTVLS HHHHEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCEEE TDDRNWEWHTPEDLWNWLKGSTAAAVDMESSTLATNGYRYRIPYGTLLSVSDLPLHAVPK CCCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEEECCEEEECCCCCEEEECCCCCCCCCC LPAQAQAFYSNSKEAHVMCAVRAMEYLAVDPERLRTRKLRRTLGEVPFR CCHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]