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The map label for this gene is ureF

Identifier: 145294149

GI number: 145294149

Start: 122365

End: 123045

Strand: Direct

Name: ureF

Synonym: cgR_0107

Alternate gene names: 145294149

Gene position: 122365-123045 (Clockwise)

Preceding gene: 145294148

Following gene: 145294150

Centisome position: 3.69

GC content: 51.69

Gene sequence:

>681_bases
ATGGATCTCGACGCTGATTTTCTGTTGCTGCATTTATCGGATTCGGCACTTCCCACAGGAGCGTTTGCGCACTCTTTTGG
ATTTGAAACCTATATGGATGCAGAGCGAATCACTAATGCCGAGGAGTTTCAAGACTGGCTGAAGGTCCTGCTCAAGGTGC
AGTTGACTAGCTCTGATGCTCTGGCGATGAGGATGTTTTACGCCACCCCGACAGCCTCCGAGCTGAAGCGGTTGGATGAG
CGTCTTTTTGCTGGAACCCCGGCGAGGGAAGTTCGGGAAGCAAATGCCCGAATGGGTACGCGCATGGCAGAGATCGTGGC
TGAAACCTACTCCGTGCCACTGATTATTGAGTATCTTGAGCTGATCAAAAACCGAGAGCTGTCTGGGCATCCGGCTTTGG
CTTTAGCTCTTGCCACCCACAGTATGGGGATAGACGTGGATCGAGCAATCCATGCTCATCTCACGGCAACGGTGAGTTCG
CTGATTCAAAACGCGGTTCGTGGAATTCCGCTTGGACAAATGGCAGGTCAGAGGGTGATGTTCGCGATGCGTGAGCATAT
CGGTGCGGCCGTGAAACGTAGCGCGATGTTGGACGCCATTGATTTCTGTTCTGGCGATCCAGGCTTGGATATTTCACAAA
TGGTTCATGAAACCCAACGTGCACGACTATTTATGAGTTAA

Upstream 100 bases:

>100_bases
ATCACACGGTGGTCAGCTTCTTGGATGATCACGACATCGAGTATCAGCGCACCGAACTTGTTCCGCCAATTCCTTTCAGA
CATAGCGGGCATACACATTG

Downstream 100 bases:

>100_bases
GAAGGAGAAAAGAAAAATGGGTCCAATCAGAATCGGCGTAGGCGGACCGGTCGGCGCCGGCAAAACGCAGCTGGTAGAGC
GGATTACGCGAGCGCTTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATPTASELKRLDE
RLFAGTPAREVREANARMGTRMAEIVAETYSVPLIIEYLELIKNRELSGHPALALALATHSMGIDVDRAIHAHLTATVSS
LIQNAVRGIPLGQMAGQRVMFAMREHIGAAVKRSAMLDAIDFCSGDPGLDISQMVHETQRARLFMS

Sequences:

>Translated_226_residues
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATPTASELKRLDE
RLFAGTPAREVREANARMGTRMAEIVAETYSVPLIIEYLELIKNRELSGHPALALALATHSMGIDVDRAIHAHLTATVSS
LIQNAVRGIPLGQMAGQRVMFAMREHIGAAVKRSAMLDAIDFCSGDPGLDISQMVHETQRARLFMS
>Mature_226_residues
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDALAMRMFYATPTASELKRLDE
RLFAGTPAREVREANARMGTRMAEIVAETYSVPLIIEYLELIKNRELSGHPALALALATHSMGIDVDRAIHAHLTATVSS
LIQNAVRGIPLGQMAGQRVMFAMREHIGAAVKRSAMLDAIDFCSGDPGLDISQMVHETQRARLFMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_CORGB (A4QA25)

Other databases:

- EMBL:   AP009044
- RefSeq:   YP_001136970.1
- STRING:   A4QA25
- GeneID:   4994190
- GenomeReviews:   AP009044_GR
- KEGG:   cgt:cgR_0107
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   QRARLFM
- ProtClustDB:   CLSK899972
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 24968; Mature: 24968

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDA
CCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
LAMRMFYATPTASELKRLDERLFAGTPAREVREANARMGTRMAEIVAETYSVPLIIEYLE
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LIKNRELSGHPALALALATHSMGIDVDRAIHAHLTATVSSLIQNAVRGIPLGQMAGQRVM
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAMREHIGAAVKRSAMLDAIDFCSGDPGLDISQMVHETQRARLFMS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLDADFLLLHLSDSALPTGAFAHSFGFETYMDAERITNAEEFQDWLKVLLKVQLTSSDA
CCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCH
LAMRMFYATPTASELKRLDERLFAGTPAREVREANARMGTRMAEIVAETYSVPLIIEYLE
HHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LIKNRELSGHPALALALATHSMGIDVDRAIHAHLTATVSSLIQNAVRGIPLGQMAGQRVM
HHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FAMREHIGAAVKRSAMLDAIDFCSGDPGLDISQMVHETQRARLFMS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA