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The map label for this gene is ydhB [H]

Identifier: 145294114

GI number: 145294114

Start: 84235

End: 84981

Strand: Reverse

Name: ydhB [H]

Synonym: cgR_0072

Alternate gene names: 145294114

Gene position: 84981-84235 (Counterclockwise)

Preceding gene: 145294115

Following gene: 145294111

Centisome position: 2.56

GC content: 59.04

Gene sequence:

>747_bases
ATGACCGCCACTTTGATAATCACGTTGTTTCTGTCACTTTTTATCGGCATTTCGCTAGGACTGTTGGGCGGTGGTGGTTC
GATCCTCACTGTTCCGATTCTGACGTATGTGGCGGGTTTGGAGCCTCGTGAAGCTATCGCCGCCTCGCTGTTTGTTGTGG
GCACAACGTCGCTGGTCAGTGCCATTAGTCACGCAAGAAATGGGCGGGTTCGGTGGAAAACTGGACTGCTGTTTGGCGCT
GCGGGCATGGTTGGCGCGTTTGGCGGTGGCCTTCTCGGTGGCTACATTCCTGGCACAATTTTGATGATCGCGTTTGCGCT
CATGATGATCGCCACGTCTACTGCGATGTTGCGGGGGCGTAAGGAGAAGAAGGGGGCGTCGAAAAGCTCTCTTTGGCGCG
TCCTTGTTGATGGCCTGGTGGTCGGCGCGGTGACCGGGCTTGTTGGTGCGGGCGGCGGCTTTTTGGTCGTGCCAGCGCTG
GCGCTGCTCGGCGGGCTGTCGATGCCGGTGGCTGTGGGTACGTCATTGGTGGTGATCACGATGAAGTCGTTTGCGGGGCT
TGCCGGGTATCTGACCAGCGTGCAGTTGGATTGGGGGCTGGTGCTGATGGTAACTGCGGCCGCCATCGTCGGTTCGCTTG
CCGGTTCGCGCCTTGCGGGGCGCGTGCCTGAGACTTTGCTCCGCAAAGGGTTCGGCGTGTTCGTACTGGTCATGGGCGTG
TTCGTGCTCGGCTTAGAGCTTTTATAA

Upstream 100 bases:

>100_bases
GGCAAATGCACTTAAACAGGCGGGATATACCGCGTACTCTATGACTGGCGGAATGAGTGCGTGGTACCAAAACAATCTGC
CGATTAAGTAGGAAGTCCCC

Downstream 100 bases:

>100_bases
GCTTTTCGACGTCTCCCTCCGGCGAAACCCAAAAAAGGAACCCTCACAGTTCGTGAGGGTTCCTTTGTCTATTAATTATT
GTGCGTTGTGCCGGACCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTATLIITLFLSLFIGISLGLLGGGGSILTVPILTYVAGLEPREAIAASLFVVGTTSLVSAISHARNGRVRWKTGLLFGA
AGMVGAFGGGLLGGYIPGTILMIAFALMMIATSTAMLRGRKEKKGASKSSLWRVLVDGLVVGAVTGLVGAGGGFLVVPAL
ALLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV
FVLGLELL

Sequences:

>Translated_248_residues
MTATLIITLFLSLFIGISLGLLGGGGSILTVPILTYVAGLEPREAIAASLFVVGTTSLVSAISHARNGRVRWKTGLLFGA
AGMVGAFGGGLLGGYIPGTILMIAFALMMIATSTAMLRGRKEKKGASKSSLWRVLVDGLVVGAVTGLVGAGGGFLVVPAL
ALLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV
FVLGLELL
>Mature_247_residues
TATLIITLFLSLFIGISLGLLGGGGSILTVPILTYVAGLEPREAIAASLFVVGTTSLVSAISHARNGRVRWKTGLLFGAA
GMVGAFGGGLLGGYIPGTILMIAFALMMIATSTAMLRGRKEKKGASKSSLWRVLVDGLVVGAVTGLVGAGGGFLVVPALA
LLGGLSMPVAVGTSLVVITMKSFAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGVF
VLGLELL

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 25077; Mature: 24946

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATLIITLFLSLFIGISLGLLGGGGSILTVPILTYVAGLEPREAIAASLFVVGTTSLVS
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AISHARNGRVRWKTGLLFGAAGMVGAFGGGLLGGYIPGTILMIAFALMMIATSTAMLRGR
HHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEKKGASKSSLWRVLVDGLVVGAVTGLVGAGGGFLVVPALALLGGLSMPVAVGTSLVVIT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCHHHEEH
MKSFAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH
FVLGLELL
HHHHHHCC
>Mature Secondary Structure 
TATLIITLFLSLFIGISLGLLGGGGSILTVPILTYVAGLEPREAIAASLFVVGTTSLVS
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AISHARNGRVRWKTGLLFGAAGMVGAFGGGLLGGYIPGTILMIAFALMMIATSTAMLRGR
HHHHHCCCCEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KEKKGASKSSLWRVLVDGLVVGAVTGLVGAGGGFLVVPALALLGGLSMPVAVGTSLVVIT
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHCCHHHEEH
MKSFAGLAGYLTSVQLDWGLVLMVTAAAIVGSLAGSRLAGRVPETLLRKGFGVFVLVMGV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHH
FVLGLELL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]