| Definition | Corynebacterium glutamicum R chromosome, complete genome. |
|---|---|
| Accession | NC_009342 |
| Length | 3,314,179 |
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The map label for this gene is 145294067
Identifier: 145294067
GI number: 145294067
Start: 25704
End: 26702
Strand: Direct
Name: 145294067
Synonym: cgR_0025
Alternate gene names: NA
Gene position: 25704-26702 (Clockwise)
Preceding gene: 145294066
Following gene: 145294068
Centisome position: 0.78
GC content: 55.46
Gene sequence:
>999_bases ATGACCGCGGCTTCGGCGTTAACTGCAGTGCTAATAATTGGGATTTCACTCGCTGTCATTGGATTTTTCGGTCCGGCTCT TCTTCGTCATGCAGCGCCAGCGCTGGCTAAAACTCCGCGCCTAGCAGTGGCGTTACTGGTCGGCGGAATCCTCATTTGGC CAACCACGCTGCTTGCGCTGAGCCTTGCTTTGGCGTGGGTGTTGGCAGGTCCAGCGCTTTTGCCAGAAAAAGCTGCTCTT GTTTGTGAACAGTGCTTGACCGCAGCTAATCCGTTTTCTGTGGAGTCCATTCAGACGGCACTGCCCACTGTGCTGCTCCT GGTTATTCCGACGGTGATTGCGGCGATGTGCACCGTTGGCATCGCGGCGCAGTTTCTGGCCCGGGTGCGGTGCTCGCGTT CCACGGCGGCGCGCGTGCAGCATGAAGCTTATCGACGTCCCCTTCTCGGCTACGACGTTTCCGTTGTCCAGGATCACCGT CCTTGGGCCCTAACGTTTTCACCTCGTCTTGGAGGAATCGCCCTTTCTTCAGGGGCGATTGATCAGTTAGCCGATGATGA ACTCGCAGCAGTTCTTGCCCACGAACAGGCGCACATGGATCAACGCCACCACATTGTCACCGCATTGGCAGACAGCATCG CAGCACAACTGCGATGGGTGCCCTTCATTCGAGAGGCTGCGGAAATCCTGCCTGACTATCTAGAAATCGCCGCTGATCAA CAAGCCTGCAGAAAAGTAAACATCACGGCGTTAGTCCGGGCTCTTTTAGTTTTGGGGGAGAAGAAAATACCGACAGGAAC CATTGGTTCAGCTGCCGGTACGTTGTTTGCTGCAGGTCCTGGACGTATTTCGCATCTGGTTGGTTCATCCACTGGTCGGA AAGGGTACGTCCCGGCACTTGCAGCAGGTAGCCAGATTCTATTGTTGGGAACTGTCAGCGTCATTGTGCTGCTGTCCTAT GCAATCGCCCTGCTAACAGGGTGTTCCTTGCCATCTTGA
Upstream 100 bases:
>100_bases GTCGGGATCGCAGTGCGTCCATTCTGCATTTCGTGGACTCGATCACTGATACTGACCGCGAGCTTCTTCTGGAGTATCTG CAACAGCAGGAGGGCAGGAA
Downstream 100 bases:
>100_bases GCGACACCAAACCACAGTGCCCACGGCCTTCGGAAACCCGCTCCGTAGGCACTGTGGTTTGGTCGGGCTTTAAAACTGGA GTGGGGACCCTCGATTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTAASALTAVLIIGISLAVIGFFGPALLRHAAPALAKTPRLAVALLVGGILIWPTTLLALSLALAWVLAGPALLPEKAAL VCEQCLTAANPFSVESIQTALPTVLLLVIPTVIAAMCTVGIAAQFLARVRCSRSTAARVQHEAYRRPLLGYDVSVVQDHR PWALTFSPRLGGIALSSGAIDQLADDELAAVLAHEQAHMDQRHHIVTALADSIAAQLRWVPFIREAAEILPDYLEIAADQ QACRKVNITALVRALLVLGEKKIPTGTIGSAAGTLFAAGPGRISHLVGSSTGRKGYVPALAAGSQILLLGTVSVIVLLSY AIALLTGCSLPS
Sequences:
>Translated_332_residues MTAASALTAVLIIGISLAVIGFFGPALLRHAAPALAKTPRLAVALLVGGILIWPTTLLALSLALAWVLAGPALLPEKAAL VCEQCLTAANPFSVESIQTALPTVLLLVIPTVIAAMCTVGIAAQFLARVRCSRSTAARVQHEAYRRPLLGYDVSVVQDHR PWALTFSPRLGGIALSSGAIDQLADDELAAVLAHEQAHMDQRHHIVTALADSIAAQLRWVPFIREAAEILPDYLEIAADQ QACRKVNITALVRALLVLGEKKIPTGTIGSAAGTLFAAGPGRISHLVGSSTGRKGYVPALAAGSQILLLGTVSVIVLLSY AIALLTGCSLPS >Mature_331_residues TAASALTAVLIIGISLAVIGFFGPALLRHAAPALAKTPRLAVALLVGGILIWPTTLLALSLALAWVLAGPALLPEKAALV CEQCLTAANPFSVESIQTALPTVLLLVIPTVIAAMCTVGIAAQFLARVRCSRSTAARVQHEAYRRPLLGYDVSVVQDHRP WALTFSPRLGGIALSSGAIDQLADDELAAVLAHEQAHMDQRHHIVTALADSIAAQLRWVPFIREAAEILPDYLEIAADQQ ACRKVNITALVRALLVLGEKKIPTGTIGSAAGTLFAAGPGRISHLVGSSTGRKGYVPALAAGSQILLLGTVSVIVLLSYA IALLTGCSLPS
Specific function: Unknown
COG id: COG0501
COG function: function code O; Zn-dependent protease with chaperone function
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34546; Mature: 34415
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00539 PYROKININ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAASALTAVLIIGISLAVIGFFGPALLRHAAPALAKTPRLAVALLVGGILIWPTTLLAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHH SLALAWVLAGPALLPEKAALVCEQCLTAANPFSVESIQTALPTVLLLVIPTVIAAMCTVG HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAQFLARVRCSRSTAARVQHEAYRRPLLGYDVSVVQDHRPWALTFSPRLGGIALSSGAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCCEEECCCCH DQLADDELAAVLAHEQAHMDQRHHIVTALADSIAAQLRWVPFIREAAEILPDYLEIAADQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QACRKVNITALVRALLVLGEKKIPTGTIGSAAGTLFAAGPGRISHLVGSSTGRKGYVPAL HHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHCCCEEECCCHHHHHHHCCCCCCCCCCHHH AAGSQILLLGTVSVIVLLSYAIALLTGCSLPS HCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAASALTAVLIIGISLAVIGFFGPALLRHAAPALAKTPRLAVALLVGGILIWPTTLLAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHH SLALAWVLAGPALLPEKAALVCEQCLTAANPFSVESIQTALPTVLLLVIPTVIAAMCTVG HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH IAAQFLARVRCSRSTAARVQHEAYRRPLLGYDVSVVQDHRPWALTFSPRLGGIALSSGAI HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCEEEEECCCCCCEEECCCCH DQLADDELAAVLAHEQAHMDQRHHIVTALADSIAAQLRWVPFIREAAEILPDYLEIAADQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH QACRKVNITALVRALLVLGEKKIPTGTIGSAAGTLFAAGPGRISHLVGSSTGRKGYVPAL HHHHHCCHHHHHHHHHHHCCCCCCCCCCCHHCCCEEECCCHHHHHHHCCCCCCCCCCHHH AAGSQILLLGTVSVIVLLSYAIALLTGCSLPS HCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA