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The map label for this gene is degV [H]

Identifier: 138896711

GI number: 138896711

Start: 3168554

End: 3169399

Strand: Reverse

Name: degV [H]

Synonym: GTNG_3074

Alternate gene names: 138896711

Gene position: 3169399-3168554 (Counterclockwise)

Preceding gene: 138896712

Following gene: 138896710

Centisome position: 89.27

GC content: 54.14

Gene sequence:

>846_bases
GTGAAAACGGCAATTGTCACGGATAGTACGGCTTATCTTCCAAAAGAGGTGCGCGAGAGGCTCGGCATTCGCTTAATTCC
GCTCAGCGTCATCTTTGGGGAGGAAACGTATCGCGAAGAAATTGACATGACTACAGATGAATTTTTCGCGAAAGTGAAGC
AACACCCGACCTTGCCGACGACGTCCCAACCAGCAGTCGGCGAGTTTGTCGACTTGTTCACTGCCCTTCGCGAGGAAGGA
TATGATGCTGTCATCAGCATTCACTTATCAAGCGGCATTAGCGGCACGTATCAAGGGGCGGTTACGGCGGGGACGATGGT
CGACGGCTTACGCGTTTTGGCGTACGATTCGGAAATCAGCTGCATGGCGCAAGGGTTTTATGCCATGGAAGCAGCGGAAA
TGGCGCAAGCAGGTCGCACCCCAGAGGAGATCATCGCCCGCTTAGACGAAATCAAGCAAACGTTGCGCGCCTATTTTATG
GTCGATGACTTAGCTCACTTACAGCGGGGTGGGCGGCTGACTGGAGCGCAGGCATTCATCGGCGGCCTGTTGCAAATCAA
GCCACTCCTTCGCTTTGAAAACAAAGTGATCGTACCGTTTGAAAAAATCCGCACACGCAAAAAAGCGGTGAAACGCATCG
AAGAACTGTTCGCCGAAGACGCGGAAAAAGGCATACCGCTGAAAGCCGCCGTCATCCACGCCAATCAGCCGGATGAAGCG
GGTCGCTGGCGCGATGAACTGTCCGCTCGTTATCCGCACGTCGAGTTTTTCATCAGCTATTTCGGTCCCGTCATCGCCAC
CCATGTTGGCGAAGGGGCACTCGGGCTGACGTGGTACCAACCGTAA

Upstream 100 bases:

>100_bases
CCCATTCTGTCGTGATGTTATACATTTCGCTTGTTAGTGGTGGGCGGCCCACCGTTTTGGTATAATGGAGGCAAACATTG
AATCAGGAAGGATGGCGTCA

Downstream 100 bases:

>100_bases
TGGTCGCAGGCTAGCGGAATTCGGCTGCAAGCCGGCGTTAGTCAAAACAAACCGCAAGGCGGTGCTGTTCAGTGATGGTT
CCACCTCGCACCGCCTTGTG

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGEETYREEIDMTTDEFFAKVKQHPTLPTTSQPAVGEFVDLFTALREEG
YDAVISIHLSSGISGTYQGAVTAGTMVDGLRVLAYDSEISCMAQGFYAMEAAEMAQAGRTPEEIIARLDEIKQTLRAYFM
VDDLAHLQRGGRLTGAQAFIGGLLQIKPLLRFENKVIVPFEKIRTRKKAVKRIEELFAEDAEKGIPLKAAVIHANQPDEA
GRWRDELSARYPHVEFFISYFGPVIATHVGEGALGLTWYQP

Sequences:

>Translated_281_residues
MKTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGEETYREEIDMTTDEFFAKVKQHPTLPTTSQPAVGEFVDLFTALREEG
YDAVISIHLSSGISGTYQGAVTAGTMVDGLRVLAYDSEISCMAQGFYAMEAAEMAQAGRTPEEIIARLDEIKQTLRAYFM
VDDLAHLQRGGRLTGAQAFIGGLLQIKPLLRFENKVIVPFEKIRTRKKAVKRIEELFAEDAEKGIPLKAAVIHANQPDEA
GRWRDELSARYPHVEFFISYFGPVIATHVGEGALGLTWYQP
>Mature_281_residues
MKTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGEETYREEIDMTTDEFFAKVKQHPTLPTTSQPAVGEFVDLFTALREEG
YDAVISIHLSSGISGTYQGAVTAGTMVDGLRVLAYDSEISCMAQGFYAMEAAEMAQAGRTPEEIIARLDEIKQTLRAYFM
VDDLAHLQRGGRLTGAQAFIGGLLQIKPLLRFENKVIVPFEKIRTRKKAVKRIEELFAEDAEKGIPLKAAVIHANQPDEA
GRWRDELSARYPHVEFFISYFGPVIATHVGEGALGLTWYQP

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31301; Mature: 31301

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGEETYREEIDMTTDEFFAKVKQHPTLPT
CCCEEECCCHHHCCHHHHHHCCEEEEEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCC
TSQPAVGEFVDLFTALREEGYDAVISIHLSSGISGTYQGAVTAGTMVDGLRVLAYDSEIS
CCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEHHHHHHCEEEEEECCCHH
CMAQGFYAMEAAEMAQAGRTPEEIIARLDEIKQTLRAYFMVDDLAHLQRGGRLTGAQAFI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GGLLQIKPLLRFENKVIVPFEKIRTRKKAVKRIEELFAEDAEKGIPLKAAVIHANQPDEA
HHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH
GRWRDELSARYPHVEFFISYFGPVIATHVGEGALGLTWYQP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC
>Mature Secondary Structure
MKTAIVTDSTAYLPKEVRERLGIRLIPLSVIFGEETYREEIDMTTDEFFAKVKQHPTLPT
CCCEEECCCHHHCCHHHHHHCCEEEEEEEEEECCHHHHHHHCCCHHHHHHHHHHCCCCCC
TSQPAVGEFVDLFTALREEGYDAVISIHLSSGISGTYQGAVTAGTMVDGLRVLAYDSEIS
CCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEHHHHHHCEEEEEECCCHH
CMAQGFYAMEAAEMAQAGRTPEEIIARLDEIKQTLRAYFMVDDLAHLQRGGRLTGAQAFI
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GGLLQIKPLLRFENKVIVPFEKIRTRKKAVKRIEELFAEDAEKGIPLKAAVIHANQPDEA
HHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHH
GRWRDELSARYPHVEFFISYFGPVIATHVGEGALGLTWYQP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 9384377; 3141378 [H]