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The map label for this gene is comFC [H]

Identifier: 138896708

GI number: 138896708

Start: 3165710

End: 3166402

Strand: Reverse

Name: comFC [H]

Synonym: GTNG_3071

Alternate gene names: 138896708

Gene position: 3166402-3165710 (Counterclockwise)

Preceding gene: 138896709

Following gene: 138896707

Centisome position: 89.19

GC content: 55.27

Gene sequence:

>693_bases
ATGAATTGTCTTCTTTGTCATTCCTCGTACAACCCGATCGCCAGCTGGCGCCAACTTCTTTTTCTCGAAGACGTTGATGT
CCTTTGCCCGCGTTGCCGCGGTTCGTTTGCGCTCATTGACGGCCGTCTTTGCGAGATGTGCGGTCGTCCGCTCGACGAGG
CGTCGCCTTCTCCATGTGCTGACTGTCTCCGCTGGCAAGAAGATGAGCAGTGGGGTGGGGTGCTTGTCAAAAATCGCTCT
GTGTACGTATACAACGACTGGATGAAAGAAGTCGTTACCTTATGGAAATTTCGTGGCGATTACGCCATTGTCGATGCGTT
TCGCCGTCCGTTTGTCCACGCGTTTCGTCAATCGTTCGGGCGCGAGTGGCACATCGTGCCGATTCCGCTAAGCCCCGAGC
GTCTGTACGAACGAGGTTTCAACCAAGCAGAAGCGCTCGCCCGCCTGCTTCCATTTCCGTCCTTTCCTTGGCTTGCCCGC
AAACATTCCGAAAAACAATCGAAAAAATCGCGCCGCGAGCGACTGGAGACGGACAATCCATTTTTCCTCACCGACTGCCC
ACCGCTCACAGGGAAACGAATCGTCCTCATCGATGATATTTACACAACCGGCATCACCGTTCGCCACGCGGCCCGCGTTT
TACGTGAAGCTGGGGCGACTGAAGTGGGATCACTGACGCTAGTGAGGGCGTGA

Upstream 100 bases:

>100_bases
TCCGCTTTTTCCACCATGGGAAAACAACCGAGATGGTACGGGCGCACCGCCATATTGTCCGCATGAACGAGACAGCGCAG
AAAAGGGGGCTGTTGCATCG

Downstream 100 bases:

>100_bases
GCAGGCTAAACATTCGCTTGTTGGATGCCGATATAAACAGTAGCAACCGATCGAGCGGAGAGTGAACGGATATGGAAATT
CGTAGCATTGTTATGAAACA

Product: competence protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MNCLLCHSSYNPIASWRQLLFLEDVDVLCPRCRGSFALIDGRLCEMCGRPLDEASPSPCADCLRWQEDEQWGGVLVKNRS
VYVYNDWMKEVVTLWKFRGDYAIVDAFRRPFVHAFRQSFGREWHIVPIPLSPERLYERGFNQAEALARLLPFPSFPWLAR
KHSEKQSKKSRRERLETDNPFFLTDCPPLTGKRIVLIDDIYTTGITVRHAARVLREAGATEVGSLTLVRA

Sequences:

>Translated_230_residues
MNCLLCHSSYNPIASWRQLLFLEDVDVLCPRCRGSFALIDGRLCEMCGRPLDEASPSPCADCLRWQEDEQWGGVLVKNRS
VYVYNDWMKEVVTLWKFRGDYAIVDAFRRPFVHAFRQSFGREWHIVPIPLSPERLYERGFNQAEALARLLPFPSFPWLAR
KHSEKQSKKSRRERLETDNPFFLTDCPPLTGKRIVLIDDIYTTGITVRHAARVLREAGATEVGSLTLVRA
>Mature_230_residues
MNCLLCHSSYNPIASWRQLLFLEDVDVLCPRCRGSFALIDGRLCEMCGRPLDEASPSPCADCLRWQEDEQWGGVLVKNRS
VYVYNDWMKEVVTLWKFRGDYAIVDAFRRPFVHAFRQSFGREWHIVPIPLSPERLYERGFNQAEALARLLPFPSFPWLAR
KHSEKQSKKSRRERLETDNPFFLTDCPPLTGKRIVLIDDIYTTGITVRHAARVLREAGATEVGSLTLVRA

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 26576; Mature: 26576

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNCLLCHSSYNPIASWRQLLFLEDVDVLCPRCRGSFALIDGRLCEMCGRPLDEASPSPCA
CCEEEECCCCCHHHHHHHHHHHHCHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHH
DCLRWQEDEQWGGVLVKNRSVYVYNDWMKEVVTLWKFRGDYAIVDAFRRPFVHAFRQSFG
HHHCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
REWHIVPIPLSPERLYERGFNQAEALARLLPFPSFPWLARKHSEKQSKKSRRERLETDNP
CCEEEEECCCCHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
FFLTDCPPLTGKRIVLIDDIYTTGITVRHAARVLREAGATEVGSLTLVRA
EEEECCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MNCLLCHSSYNPIASWRQLLFLEDVDVLCPRCRGSFALIDGRLCEMCGRPLDEASPSPCA
CCEEEECCCCCHHHHHHHHHHHHCHHHHHHCCCCCEEEECCHHHHHCCCCCCCCCCCHHH
DCLRWQEDEQWGGVLVKNRSVYVYNDWMKEVVTLWKFRGDYAIVDAFRRPFVHAFRQSFG
HHHCCCCCCCCCCEEEECCEEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
REWHIVPIPLSPERLYERGFNQAEALARLLPFPSFPWLARKHSEKQSKKSRRERLETDNP
CCEEEEECCCCHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
FFLTDCPPLTGKRIVLIDDIYTTGITVRHAARVLREAGATEVGSLTLVRA
EEEECCCCCCCCEEEEEECHHHCCCHHHHHHHHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]