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The map label for this gene is yvoD [H]

Identifier: 138896667

GI number: 138896667

Start: 3125344

End: 3126282

Strand: Reverse

Name: yvoD [H]

Synonym: GTNG_3030

Alternate gene names: 138896667

Gene position: 3126282-3125344 (Counterclockwise)

Preceding gene: 138896668

Following gene: 138896666

Centisome position: 88.06

GC content: 56.34

Gene sequence:

>939_bases
ATGATCGGAACGTTGCAGCGCGGCGTGCTCGCCGGGCTGAAGACGTCGTGGGCGCTCGGGAAAATCATTTTTCCGGTGAC
GCTCCTTTTGGCATTATTGCAGCCGACGCCGCTTTTTTCATGGCTCATTGACTTTGTTGCTCCGTTCATGAAATGGCTCG
GTTTATCCGGCGATGCGGCCGTGCCGCTTGTGCTCGGCAATTTGCTTGGGCTATACGCGGCGATCGGGGCGATGTTGACG
ATCGAGTTTACGGTGAAGGAAGTGTTGATTTTGGCGATCATGCTTTCTTTTTGCCATAACTTGATCGTCGAATCATCGGT
TGCCTCGCGTACGGGAATGAGCGTGACGCTCATGGTCATCGTGCGCGTCGGACTCGCCATTGTGTCCGCATTGCTGATCG
CCCATTTATGGGATGGAGGCCAGGAAATCGCCCAATACGGCTTTATGCCGCAGGAAGACGCGCCGCCTGTCGGCTGGGGA
GCGATCGCCTTGGTGGCGTTGAAGAAAGCGGCTACTGGCATCGTGCAGTTGGTCGTGATCGTCATTCCGCTGATGACGGT
CATTCAAGTGTTGAAAGAACGCCATTGGATTGAGACATTTTCGCGATGGATGTCACCGGCGACGAAGGCGCTCGGCATGA
GCCCGAACACGTCGCTGACGCTGGCGGCCGGGTTTGTGTTCGGCCTTGCTTATGGCGCCGGCGTCATGATTCAAGCGGCG
AAAGAAGACGGCGTCTCCAAGCGTGACTTAACGTTGGCGTTCATTTTTCTCGTCTCGTGCCATGCGGTTGTGGAGGACAC
ACTCATTTTCGTTCCGCTTGGCATTCCGGTATGGCCGCTGCTTGTGATCCGCCTAGTGACGGCCGTATTGCTGACGATGG
CGGTGGCGTTCATTTGGCGCCGCCTGGAACAACCGAAAAGAAAGGAAGCCGCTTCATGA

Upstream 100 bases:

>100_bases
GTGCGTCGGGCAAAAGGATGGGCAAGAGAACGGTATATGGACTAGTGGCGCCATAGGTCGCCTCTTACATATGGAAGACA
AGCAAAGGAGAGAGGAGAAC

Downstream 100 bases:

>100_bases
CGATTCGTACCATTTTATTTGACCTTGACGGAACGTTGATTGATACAAATGAGCTGATCATCCAGTCGTTTTTGCATACG
CTCGAGAGGTACTATCCGGG

Product: OrfX/ integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIGTLQRGVLAGLKTSWALGKIIFPVTLLLALLQPTPLFSWLIDFVAPFMKWLGLSGDAAVPLVLGNLLGLYAAIGAMLT
IEFTVKEVLILAIMLSFCHNLIVESSVASRTGMSVTLMVIVRVGLAIVSALLIAHLWDGGQEIAQYGFMPQEDAPPVGWG
AIALVALKKAATGIVQLVVIVIPLMTVIQVLKERHWIETFSRWMSPATKALGMSPNTSLTLAAGFVFGLAYGAGVMIQAA
KEDGVSKRDLTLAFIFLVSCHAVVEDTLIFVPLGIPVWPLLVIRLVTAVLLTMAVAFIWRRLEQPKRKEAAS

Sequences:

>Translated_312_residues
MIGTLQRGVLAGLKTSWALGKIIFPVTLLLALLQPTPLFSWLIDFVAPFMKWLGLSGDAAVPLVLGNLLGLYAAIGAMLT
IEFTVKEVLILAIMLSFCHNLIVESSVASRTGMSVTLMVIVRVGLAIVSALLIAHLWDGGQEIAQYGFMPQEDAPPVGWG
AIALVALKKAATGIVQLVVIVIPLMTVIQVLKERHWIETFSRWMSPATKALGMSPNTSLTLAAGFVFGLAYGAGVMIQAA
KEDGVSKRDLTLAFIFLVSCHAVVEDTLIFVPLGIPVWPLLVIRLVTAVLLTMAVAFIWRRLEQPKRKEAAS
>Mature_312_residues
MIGTLQRGVLAGLKTSWALGKIIFPVTLLLALLQPTPLFSWLIDFVAPFMKWLGLSGDAAVPLVLGNLLGLYAAIGAMLT
IEFTVKEVLILAIMLSFCHNLIVESSVASRTGMSVTLMVIVRVGLAIVSALLIAHLWDGGQEIAQYGFMPQEDAPPVGWG
AIALVALKKAATGIVQLVVIVIPLMTVIQVLKERHWIETFSRWMSPATKALGMSPNTSLTLAAGFVFGLAYGAGVMIQAA
KEDGVSKRDLTLAFIFLVSCHAVVEDTLIFVPLGIPVWPLLVIRLVTAVLLTMAVAFIWRRLEQPKRKEAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 33624; Mature: 33624

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTLQRGVLAGLKTSWALGKIIFPVTLLLALLQPTPLFSWLIDFVAPFMKWLGLSGDAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
VPLVLGNLLGLYAAIGAMLTIEFTVKEVLILAIMLSFCHNLIVESSVASRTGMSVTLMVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VRVGLAIVSALLIAHLWDGGQEIAQYGFMPQEDAPPVGWGAIALVALKKAATGIVQLVVI
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VIPLMTVIQVLKERHWIETFSRWMSPATKALGMSPNTSLTLAAGFVFGLAYGAGVMIQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEH
KEDGVSKRDLTLAFIFLVSCHAVVEDTLIFVPLGIPVWPLLVIRLVTAVLLTMAVAFIWR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLEQPKRKEAAS
HHCCHHHHCCCC
>Mature Secondary Structure
MIGTLQRGVLAGLKTSWALGKIIFPVTLLLALLQPTPLFSWLIDFVAPFMKWLGLSGDAA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
VPLVLGNLLGLYAAIGAMLTIEFTVKEVLILAIMLSFCHNLIVESSVASRTGMSVTLMVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VRVGLAIVSALLIAHLWDGGQEIAQYGFMPQEDAPPVGWGAIALVALKKAATGIVQLVVI
HHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VIPLMTVIQVLKERHWIETFSRWMSPATKALGMSPNTSLTLAAGFVFGLAYGAGVMIQAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEH
KEDGVSKRDLTLAFIFLVSCHAVVEDTLIFVPLGIPVWPLLVIRLVTAVLLTMAVAFIWR
HHCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
RLEQPKRKEAAS
HHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]