Click here to switch to the map view.

The map label for this gene is ytlA [H]

Identifier: 138896391

GI number: 138896391

Start: 2872721

End: 2873725

Strand: Direct

Name: ytlA [H]

Synonym: GTNG_2754

Alternate gene names: 138896391

Gene position: 2872721-2873725 (Clockwise)

Preceding gene: 138896388

Following gene: 138896392

Centisome position: 80.91

GC content: 48.46

Gene sequence:

>1005_bases
ATGAAAAAATGGGCTGTATGGTTATGTTCACTTCTTCTCCTCTTGCCGCTCGCTGCCTGCGGCAACGACGCCGATCAAAA
AGAAAAAACGCTGACAAAAGTCCGTCTCGCTGAAGTGACGCGTTCGATTTTTTATGCGCCACAGTACGTCGCCTTAGCGA
AAGGATTTTTTGAAGAAGAAGGGCTCGATGTCGAGCTGACGACGACGTGGGGCGGTGACAAAACGATGACGACGCTGCTG
TCTGGTGGCGCGGACATCGCCCTTGTCGGTTCGGAAACGTCGATTTATGTGTATGCGCAAGGGACGAATGATCCGGTCAT
CAACTTCGCCCAGCTGACGCAAACAGATGGAACGTTTCTCGTTTCCCGGAAAAAAATCGACAACTTTACTTGGGAGATGT
TGAAAGGAAGCACGTTCCTCGGCCAGCGCAAAGGCGGCATGCCGCAGATGGTTGGCGAATTTGTGTTGAAACAACACGGC
ATTGACCCGCATCAAGACTTGAAGCTGATTCAAAACGTCGATTTTGCTAATATCGCCAACGCTTTTGCGAGCGGCACCGG
CGATTTCGTCCAACTGTTTGAACCGACTGCTAGCATTTTTGAGCAAGAAGGAAAAGGCTACATTATCGCTTCCTTTGGCA
CCGAATCGGGGCGCGTTCCGTACACGACGTACATGGCAAAACAAAGCTATATGAACAAGAACAAAGACATCATCGAAAAA
TTTACGCGCGCCATCTACAAAGCGCAACAATGGGTCGAATCACACAGCACCAAAGAAATTGCCAAAGTCATTCAACCATA
CTTTGAGGACACGGAATTGGACATTATCGAAACAGTCGTCGATCGATACAAAAGTCAAGGCTCTTACGCGACCGATCCGA
TTTTAGATGAGGAAGAATGGAACAACTTGCAAAACATCATGGATGAAGCCGGCGAGCTGCCAAAACGAATCGACCTCGAC
ACACTCGTTGATTCGTCGTTTGCCAAAAAAGTCATGAACGACTAA

Upstream 100 bases:

>100_bases
TTTCGCCCATTTTTTCTAGGCATTCACACATTTTTCGCCTGTGCATACGATAAGGTGAAGCGAATGTTCACCACGTGTGG
ACGAAAAGGGGGTAGGTCAC

Downstream 100 bases:

>100_bases
CGAAAGCGGGTGAACCGGATGTTTCTTGTCATCGACCGTCTCTCGCACACGTATTTTACGAAAACAACCGCCGTCACCGC
GCTCGCTGAGGTGTCGCTGT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MKKWAVWLCSLLLLLPLAACGNDADQKEKTLTKVRLAEVTRSIFYAPQYVALAKGFFEEEGLDVELTTTWGGDKTMTTLL
SGGADIALVGSETSIYVYAQGTNDPVINFAQLTQTDGTFLVSRKKIDNFTWEMLKGSTFLGQRKGGMPQMVGEFVLKQHG
IDPHQDLKLIQNVDFANIANAFASGTGDFVQLFEPTASIFEQEGKGYIIASFGTESGRVPYTTYMAKQSYMNKNKDIIEK
FTRAIYKAQQWVESHSTKEIAKVIQPYFEDTELDIIETVVDRYKSQGSYATDPILDEEEWNNLQNIMDEAGELPKRIDLD
TLVDSSFAKKVMND

Sequences:

>Translated_334_residues
MKKWAVWLCSLLLLLPLAACGNDADQKEKTLTKVRLAEVTRSIFYAPQYVALAKGFFEEEGLDVELTTTWGGDKTMTTLL
SGGADIALVGSETSIYVYAQGTNDPVINFAQLTQTDGTFLVSRKKIDNFTWEMLKGSTFLGQRKGGMPQMVGEFVLKQHG
IDPHQDLKLIQNVDFANIANAFASGTGDFVQLFEPTASIFEQEGKGYIIASFGTESGRVPYTTYMAKQSYMNKNKDIIEK
FTRAIYKAQQWVESHSTKEIAKVIQPYFEDTELDIIETVVDRYKSQGSYATDPILDEEEWNNLQNIMDEAGELPKRIDLD
TLVDSSFAKKVMND
>Mature_334_residues
MKKWAVWLCSLLLLLPLAACGNDADQKEKTLTKVRLAEVTRSIFYAPQYVALAKGFFEEEGLDVELTTTWGGDKTMTTLL
SGGADIALVGSETSIYVYAQGTNDPVINFAQLTQTDGTFLVSRKKIDNFTWEMLKGSTFLGQRKGGMPQMVGEFVLKQHG
IDPHQDLKLIQNVDFANIANAFASGTGDFVQLFEPTASIFEQEGKGYIIASFGTESGRVPYTTYMAKQSYMNKNKDIIEK
FTRAIYKAQQWVESHSTKEIAKVIQPYFEDTELDIIETVVDRYKSQGSYATDPILDEEEWNNLQNIMDEAGELPKRIDLD
TLVDSSFAKKVMND

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 37439; Mature: 37439

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWAVWLCSLLLLLPLAACGNDADQKEKTLTKVRLAEVTRSIFYAPQYVALAKGFFEEE
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GLDVELTTTWGGDKTMTTLLSGGADIALVGSETSIYVYAQGTNDPVINFAQLTQTDGTFL
CCCEEEEECCCCCHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCEEHHHHHCCCCEEE
VSRKKIDNFTWEMLKGSTFLGQRKGGMPQMVGEFVLKQHGIDPHQDLKLIQNVDFANIAN
EEHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
AFASGTGDFVQLFEPTASIFEQEGKGYIIASFGTESGRVPYTTYMAKQSYMNKNKDIIEK
HHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHH
FTRAIYKAQQWVESHSTKEIAKVIQPYFEDTELDIIETVVDRYKSQGSYATDPILDEEEW
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
NNLQNIMDEAGELPKRIDLDTLVDSSFAKKVMND
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKWAVWLCSLLLLLPLAACGNDADQKEKTLTKVRLAEVTRSIFYAPQYVALAKGFFEEE
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHC
GLDVELTTTWGGDKTMTTLLSGGADIALVGSETSIYVYAQGTNDPVINFAQLTQTDGTFL
CCCEEEEECCCCCHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCCEEHHHHHCCCCEEE
VSRKKIDNFTWEMLKGSTFLGQRKGGMPQMVGEFVLKQHGIDPHQDLKLIQNVDFANIAN
EEHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH
AFASGTGDFVQLFEPTASIFEQEGKGYIIASFGTESGRVPYTTYMAKQSYMNKNKDIIEK
HHHCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHH
FTRAIYKAQQWVESHSTKEIAKVIQPYFEDTELDIIETVVDRYKSQGSYATDPILDEEEW
HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
NNLQNIMDEAGELPKRIDLDTLVDSSFAKKVMND
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]