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The map label for this gene is ytmP [H]

Identifier: 138896367

GI number: 138896367

Start: 2846380

End: 2847066

Strand: Reverse

Name: ytmP [H]

Synonym: GTNG_2730

Alternate gene names: 138896367

Gene position: 2847066-2846380 (Counterclockwise)

Preceding gene: 138896368

Following gene: 138896365

Centisome position: 80.19

GC content: 52.84

Gene sequence:

>687_bases
TTGAAACGGAACTCTTCCCCGTTTCTTGCCGTATTGTCGGCGGAAGGGATCGTCCCGAAGCTCGTCTGGACGAAACGGAT
GGAAAATGGCGATGTGTTTACGGCCCAGCAGTGGCTGAACGGCCGGGAGCTGAAGCCGCATGAGATGGGAAGCGAACAGG
TGGCGGCGTTGTTGCGGAAAATTCATGGCTCCAAAGAGCTGGTGACGATGCTTAAGCGGCTCGGCAAAACGCCGCTGCAT
CCCGAGAAGATGCTCGCTGCGCTCACCGAGCGGCAACGACGTCATCCGATCGGCGCTGCGGCCGTTCGTGAAGCGCTTAG
CTGGCTTAGGCAACATGTATCGTTCTTGCCTGATGATCAGCACGTCGTTTGCCACTGTGACATTAACCATAACAATTGGC
TGCTTGCTGATGACGGCACATTGTACTTGATCGATTGGGATGGAGCTGTTATTGCGGATCCGGCCATTGACATCGGCATG
TTGCTTCATTTATACATTCCGCGCGCTGAGTGGGAAGTGTGGCTTCATCAGTATGGATTGGCATGGACGGAGGGACTTGC
CCTCCGTCTGAAATGGTATGCCATCGCCCATACATTGCATTCACTGTTTTGGCCGAAAGGGAAGGATAGTCAAAAAGAAA
GGGAACAATCGTTGCAATTATTGCAGTACATTATAGCGGAACAGTAA

Upstream 100 bases:

>100_bases
TGCTTTGGAACAGTTACTAGGTAAGGAGTGGGAGATCACTCCGGCCGGCGGTGCAACAGGGGATGCGTATTTTGCCGAAT
ATGAAGGGAAGAAACTGTTT

Downstream 100 bases:

>100_bases
GCCGTTGAACGTTGCCGAAACGGTCTTCGAAAAAGAAAACAGAACGCTGGCAACGTTTCACGGCCTCTCATGTTTGACCA
GTCTTAGCCGCGCTGTTTAT

Product: putative choline kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVFTAQQWLNGRELKPHEMGSEQVAALLRKIHGSKELVTMLKRLGKTPLH
PEKMLAALTERQRRHPIGAAAVREALSWLRQHVSFLPDDQHVVCHCDINHNNWLLADDGTLYLIDWDGAVIADPAIDIGM
LLHLYIPRAEWEVWLHQYGLAWTEGLALRLKWYAIAHTLHSLFWPKGKDSQKEREQSLQLLQYIIAEQ

Sequences:

>Translated_228_residues
MKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVFTAQQWLNGRELKPHEMGSEQVAALLRKIHGSKELVTMLKRLGKTPLH
PEKMLAALTERQRRHPIGAAAVREALSWLRQHVSFLPDDQHVVCHCDINHNNWLLADDGTLYLIDWDGAVIADPAIDIGM
LLHLYIPRAEWEVWLHQYGLAWTEGLALRLKWYAIAHTLHSLFWPKGKDSQKEREQSLQLLQYIIAEQ
>Mature_228_residues
MKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVFTAQQWLNGRELKPHEMGSEQVAALLRKIHGSKELVTMLKRLGKTPLH
PEKMLAALTERQRRHPIGAAAVREALSWLRQHVSFLPDDQHVVCHCDINHNNWLLADDGTLYLIDWDGAVIADPAIDIGM
LLHLYIPRAEWEVWLHQYGLAWTEGLALRLKWYAIAHTLHSLFWPKGKDSQKEREQSLQLLQYIIAEQ

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 26213; Mature: 26213

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVFTAQQWLNGRELKPHEMGSEQVAALLRK
CCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEHHHHCCCCCCCHHHCCHHHHHHHHHH
IHGSKELVTMLKRLGKTPLHPEKMLAALTERQRRHPIGAAAVREALSWLRQHVSFLPDDQ
HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
HVVCHCDINHNNWLLADDGTLYLIDWDGAVIADPAIDIGMLLHLYIPRAEWEVWLHQYGL
EEEEEEEECCCCEEEECCCEEEEEECCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHCC
AWTEGLALRLKWYAIAHTLHSLFWPKGKDSQKEREQSLQLLQYIIAEQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRNSSPFLAVLSAEGIVPKLVWTKRMENGDVFTAQQWLNGRELKPHEMGSEQVAALLRK
CCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEHHHHCCCCCCCHHHCCHHHHHHHHHH
IHGSKELVTMLKRLGKTPLHPEKMLAALTERQRRHPIGAAAVREALSWLRQHVSFLPDDQ
HCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCC
HVVCHCDINHNNWLLADDGTLYLIDWDGAVIADPAIDIGMLLHLYIPRAEWEVWLHQYGL
EEEEEEEECCCCEEEECCCEEEEEECCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHCC
AWTEGLALRLKWYAIAHTLHSLFWPKGKDSQKEREQSLQLLQYIIAEQ
HHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]