| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is bfmBAA [H]
Identifier: 138895948
GI number: 138895948
Start: 2428983
End: 2429978
Strand: Reverse
Name: bfmBAA [H]
Synonym: GTNG_2307
Alternate gene names: 138895948
Gene position: 2429978-2428983 (Counterclockwise)
Preceding gene: 138895949
Following gene: 138895947
Centisome position: 68.44
GC content: 53.71
Gene sequence:
>996_bases ATGGCGCAAAACCGTCACCAAGCGCTCGGATTAAGCGATGACACTGTGTTGCAAATGTACGAAACGATGCTTCTCGCCCG CAAGCTCGATGAGCGGATGTGGCTGTTAAACCGCGCTGGGAAAATTCCGTTTGTCATCTCGTGCCAAGGGCAAGAAGCAG CGCAAGTCGGCGCGGCGTTTGCTCTTGACCGGACGAAAGACTACATCTTGCCATATTATCGCGATATGGGCGTTGTCTTG ACGTTCGGTATGACGCCGACGGAATTGATGCTTGCCGCGTTTGCTAAAGCGGAAGACCCGAACTCCGGTGGCCGACAAAT GCCGGGCCATTTCGGGCAAAAGAAAAACCGAATCGTCACCGGTTCCTCGCCTGTGACGACACAAGTGCCACATGCAGTTG GTTTTGCTTTGGCGGCGAAAATGGAAAAGAAAGATTTTGTCGCCTTCGTCACGTTCGGGGAAGGATCGTCGAACCAAGGC GACTTCCATGAAGGAGCAAACTTTGCCGGCGTTCATAAACTCCCTGTCATCTTTATGTGCGAAAACAACAAGTACGCCAT TTCCGTGCCGATTTCGAAACAATTGGCGTGCGAAAAAGTATCCGACCGCGCCATTGGCTATGGCATGCCGGGCTATACGG TCGATGGCACGGACCCGCTTGAAGTGTACCGCGTCGTCAAGGAAGCGGCTGACCGCGCTCGCCGCGGTGAAGGGCCGACG CTCATTGAGGCGGTGACATACCGATTGACGTCGCACTCGTCCGATGACGATCACCGCGTCTACCGGACTGAGGAAGAATT GGCTGAAGCACGCGCCAAAGATCCGATCGTCTCGTTTGCCAATTACTTAAAAGAAGTCGGTGTCTTAACTGATGCGCTTG ATGAAGACATTCAAGCACGTGTCATGAAACAAGTGAACGAAGCGACTGACTATGCGGAAAAAGCACCGTACGCCGAGCCG GAACATGCGCTTCGCTACGTGTATGCCGAGGAGTAA
Upstream 100 bases:
>100_bases GCCATTCACTTTTAATTTTGCCGCATGAGGACGAAAGATTGGCAACAGGCAGCTTACATAATGAGCTGCAATGGATTTTT AATTAAGGGAGGTTGTTCCG
Downstream 100 bases:
>100_bases GGGGGAATTAGACGATGCCTGTTATTTCATATATTGATGCGGTCACGATGGCTATTCGCGAAGAGATGGAACGCGATTCG CGCGTGTTTGTATTAGGGGA
Product: 2-oxoisovalerate dehydrogenase subunit alpha
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; BCKDH E1-alpha [H]
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MAQNRHQALGLSDDTVLQMYETMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALDRTKDYILPYYRDMGVVL TFGMTPTELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGFALAAKMEKKDFVAFVTFGEGSSNQG DFHEGANFAGVHKLPVIFMCENNKYAISVPISKQLACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPT LIEAVTYRLTSHSSDDDHRVYRTEEELAEARAKDPIVSFANYLKEVGVLTDALDEDIQARVMKQVNEATDYAEKAPYAEP EHALRYVYAEE
Sequences:
>Translated_331_residues MAQNRHQALGLSDDTVLQMYETMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALDRTKDYILPYYRDMGVVL TFGMTPTELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGFALAAKMEKKDFVAFVTFGEGSSNQG DFHEGANFAGVHKLPVIFMCENNKYAISVPISKQLACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPT LIEAVTYRLTSHSSDDDHRVYRTEEELAEARAKDPIVSFANYLKEVGVLTDALDEDIQARVMKQVNEATDYAEKAPYAEP EHALRYVYAEE >Mature_330_residues AQNRHQALGLSDDTVLQMYETMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAFALDRTKDYILPYYRDMGVVLT FGMTPTELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVTGSSPVTTQVPHAVGFALAAKMEKKDFVAFVTFGEGSSNQGD FHEGANFAGVHKLPVIFMCENNKYAISVPISKQLACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPTL IEAVTYRLTSHSSDDDHRVYRTEEELAEARAKDPIVSFANYLKEVGVLTDALDEDIQARVMKQVNEATDYAEKAPYAEPE HALRYVYAEE
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BCKDHA family [H]
Homologues:
Organism=Homo sapiens, GI11386135, Length=321, Percent_Identity=38.6292834890966, Blast_Score=205, Evalue=5e-53, Organism=Homo sapiens, GI258645172, Length=321, Percent_Identity=38.6292834890966, Blast_Score=201, Evalue=6e-52, Organism=Homo sapiens, GI4885543, Length=317, Percent_Identity=31.8611987381703, Blast_Score=147, Evalue=2e-35, Organism=Homo sapiens, GI291084742, Length=323, Percent_Identity=31.8885448916409, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI4505685, Length=323, Percent_Identity=31.8885448916409, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI291084744, Length=330, Percent_Identity=31.2121212121212, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI291084757, Length=324, Percent_Identity=28.0864197530864, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI86563355, Length=329, Percent_Identity=39.209726443769, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI86563357, Length=329, Percent_Identity=39.209726443769, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17536047, Length=318, Percent_Identity=31.4465408805031, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI32564172, Length=318, Percent_Identity=31.4465408805031, Blast_Score=132, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321026, Length=324, Percent_Identity=33.3333333333333, Blast_Score=151, Evalue=2e-37, Organism=Drosophila melanogaster, GI21355903, Length=302, Percent_Identity=33.4437086092715, Blast_Score=175, Evalue=4e-44, Organism=Drosophila melanogaster, GI24639740, Length=323, Percent_Identity=33.1269349845201, Blast_Score=138, Evalue=5e-33, Organism=Drosophila melanogaster, GI24639744, Length=323, Percent_Identity=33.1269349845201, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI28571106, Length=323, Percent_Identity=33.1269349845201, Blast_Score=138, Evalue=6e-33, Organism=Drosophila melanogaster, GI24639746, Length=284, Percent_Identity=34.1549295774648, Blast_Score=134, Evalue=8e-32, Organism=Drosophila melanogaster, GI24639748, Length=325, Percent_Identity=30.7692307692308, Blast_Score=121, Evalue=8e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.4 [H]
Molecular weight: Translated: 36676; Mature: 36545
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQNRHQALGLSDDTVLQMYETMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAF CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH ALDRTKDYILPYYRDMGVVLTFGMTPTELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVT HHHCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE GSSPVTTQVPHAVGFALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMC CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCCCCCCEECCCEEEEE ENNKYAISVPISKQLACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPT CCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH LIEAVTYRLTSHSSDDDHRVYRTEEELAEARAKDPIVSFANYLKEVGVLTDALDEDIQAR HHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VMKQVNEATDYAEKAPYAEPEHALRYVYAEE HHHHHHHHHHHHHHCCCCCHHHHEEEEEECC >Mature Secondary Structure AQNRHQALGLSDDTVLQMYETMLLARKLDERMWLLNRAGKIPFVISCQGQEAAQVGAAF CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHH ALDRTKDYILPYYRDMGVVLTFGMTPTELMLAAFAKAEDPNSGGRQMPGHFGQKKNRIVT HHHCCCCCCCHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEE GSSPVTTQVPHAVGFALAAKMEKKDFVAFVTFGEGSSNQGDFHEGANFAGVHKLPVIFMC CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHCCCCCCCEECCCEEEEE ENNKYAISVPISKQLACEKVSDRAIGYGMPGYTVDGTDPLEVYRVVKEAADRARRGEGPT CCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCH LIEAVTYRLTSHSSDDDHRVYRTEEELAEARAKDPIVSFANYLKEVGVLTDALDEDIQAR HHHHHHHHHHCCCCCCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VMKQVNEATDYAEKAPYAEPEHALRYVYAEE HHHHHHHHHHHHHHCCCCCHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377 [H]