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The map label for this gene is yqjB [H]

Identifier: 138895936

GI number: 138895936

Start: 2414555

End: 2415061

Strand: Reverse

Name: yqjB [H]

Synonym: GTNG_2295

Alternate gene names: 138895936

Gene position: 2415061-2414555 (Counterclockwise)

Preceding gene: 138895937

Following gene: 138895934

Centisome position: 68.02

GC content: 55.03

Gene sequence:

>507_bases
ATGCGTAAATCGTTAGCGCTCTGCCTGCTGCTTAGTGCGCTGTTGGTCGTGCCGTTTCAGACGGCGGCGGAGATGAAGCC
GCTGGTGATTGTGAACAAAGCGATCAATAAGCTTGCACTCATTCGTGATGGGCGCATTGAAGCAGTTTATCCGGTGGCGA
CGGGGATGAATGCTGGACTGACACCGGAAGGAATGTTTACGGTGACGGTGAAGGCGGAAAATCCGTACTATCGGAAAAAG
GGCATTCCAGGCGGAGCACCGAACAACCCGCTCGGCACGAGATGGATCGGTTTTAATGCGCGGGGGACGGATGGGCGCAT
CTATGGCGTCCACGGGACAAACAACCCCGCATCGATTGGAGGTTATGTTTCGCAAGGCTGTGTGCGCATGCATAACCGCG
ATGTTGAGCATTTGTACGAACGGGTACCGATCGGCGCCCGTGTGCTCATTCTTCGCAGCAACGAGTCATTTTACGCCATT
GCCAAACGATACGGCGCTGTCCAATGA

Upstream 100 bases:

>100_bases
GCGTCGTTTGTTGCCGTTTGGCTGAACGAAGTGATGTGCATACCCCCATCTTGGTTAGCGCACACTAAAGCTAAACGTCA
GCAAAGGGTGGGGGCTTGAT

Downstream 100 bases:

>100_bases
AAAACGCAAGCTTCCCTATTTTGGAGCTTGCGTTTTTTGCTGAGTGCGGCTAAAACCACATGCTGATGCCGGCAAGGAGC
GTCGTCAGCAGCATGCAAAT

Product: protein ErfK/SrfK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MRKSLALCLLLSALLVVPFQTAAEMKPLVIVNKAINKLALIRDGRIEAVYPVATGMNAGLTPEGMFTVTVKAENPYYRKK
GIPGGAPNNPLGTRWIGFNARGTDGRIYGVHGTNNPASIGGYVSQGCVRMHNRDVEHLYERVPIGARVLILRSNESFYAI
AKRYGAVQ

Sequences:

>Translated_168_residues
MRKSLALCLLLSALLVVPFQTAAEMKPLVIVNKAINKLALIRDGRIEAVYPVATGMNAGLTPEGMFTVTVKAENPYYRKK
GIPGGAPNNPLGTRWIGFNARGTDGRIYGVHGTNNPASIGGYVSQGCVRMHNRDVEHLYERVPIGARVLILRSNESFYAI
AKRYGAVQ
>Mature_168_residues
MRKSLALCLLLSALLVVPFQTAAEMKPLVIVNKAINKLALIRDGRIEAVYPVATGMNAGLTPEGMFTVTVKAENPYYRKK
GIPGGAPNNPLGTRWIGFNARGTDGRIYGVHGTNNPASIGGYVSQGCVRMHNRDVEHLYERVPIGARVLILRSNESFYAI
AKRYGAVQ

Specific function: Unknown

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=126, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=4e-13,
Organism=Escherichia coli, GI1787040, Length=70, Percent_Identity=42.8571428571429, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 18284; Mature: 18284

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSLALCLLLSALLVVPFQTAAEMKPLVIVNKAINKLALIRDGRIEAVYPVATGMNAGL
CCCHHHHHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHEEEEECCCEEEEEEEECCCCCCC
TPEGMFTVTVKAENPYYRKKGIPGGAPNNPLGTRWIGFNARGTDGRIYGVHGTNNPASIG
CCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCC
GYVSQGCVRMHNRDVEHLYERVPIGARVLILRSNESFYAIAKRYGAVQ
HHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCEEEHHHHHCCCC
>Mature Secondary Structure
MRKSLALCLLLSALLVVPFQTAAEMKPLVIVNKAINKLALIRDGRIEAVYPVATGMNAGL
CCCHHHHHHHHHHHHHCCCCHHHCCCCEEEEHHHHHHEEEEECCCEEEEEEEECCCCCCC
TPEGMFTVTVKAENPYYRKKGIPGGAPNNPLGTRWIGFNARGTDGRIYGVHGTNNPASIG
CCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCC
GYVSQGCVRMHNRDVEHLYERVPIGARVLILRSNESFYAIAKRYGAVQ
HHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCCEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]