Click here to switch to the map view.

The map label for this gene is pucR [H]

Identifier: 138895928

GI number: 138895928

Start: 2405166

End: 2406848

Strand: Reverse

Name: pucR [H]

Synonym: GTNG_2287

Alternate gene names: 138895928

Gene position: 2406848-2405166 (Counterclockwise)

Preceding gene: 138895929

Following gene: 138895923

Centisome position: 67.79

GC content: 40.64

Gene sequence:

>1683_bases
ATGTGGCTTTCGATGAAAGATGTGTTGGATACAGAGATTTTATCGCCGGCAAAGGTGCGAACGGCTATACACAGACTTGA
AAATATTCCAGTCGAGTGGGTATCGGTCATGGAATATCCCGTTGAGGATTATATTCGCAAAAATGAATTCGTATTAAGCA
CAGGCATTGGCTGTCATGAAGACATAGATGTATTTCGAAATTTTGTTCTTGATGTTTTGCATTCCGGGGCTTCCGCGTTA
GCCATTGCTTTAGGGCGATATATCAAGGAGATACCGATGGAGATCATTCATTTAGCCGAGAAACATGGGTTTCCTATTAT
CGAACTCCCTTGGAACATTCGGTTTTCTGATATTGTCCAAGCTGTGCTGAGCAGGCTCAACCATTGGCACACACACACCA
TGAATCACTATGAAAAAATCCAAAAAGAACTTCTTCATCTATTTTTGTCAGATGGAACGTTATCACAAGCTGCCGATATC
ATCGAACAACAAATAGGAACGCCGGTTGTTATTGTAGATGTTCATGGAGTTGTCAAGGGGAAGAGCAAAAATTCCGATTC
GTTAATGATGAAACTGGAAAGCCATGTACGGCCACTTTCCTATCACGAAGTTCTGGACAGGTCGAATAATTACGCCATCG
ATATTGACTCGCTCGATGTTACAGATTCTATTCTTCAAGCGAGCATCCGGACGACTAATCAAAAAACAAATGGATTTTTG
CTTTTCGAATACTCAAAAGCAGTTAGATCCGATCCAGTGATTACTAAGGAACAACAGTATATGCTAGAGTATATCACAAC
GGCTGTATCGTTATGGTTTCAGAAGGAAATGGCTATTAAAGAAACAGAATGGCGATTAAAAGATGATTTTGTTTGGAGTC
TAGCTAGCGGAGAGTATCATTCTTGGGATTATATTTTGTCAAGGGCTAAATCTTTAGGATACAACGTGAATCTCCCGTAT
GTGTGTGTGATTGGTTTTGCCGAGAACCTCAAGAGCCTTTTCCAGAAAATAAAGCCGAATAAAATCACATACGAGCAGTG
GATGCCGTCGATGATTCGTTCCATTGAGGAGCAAGTTGTGTTAGCTGGTAAATGGATTCATAAAGAAGTGATGGTCACTT
ATCAACAGGAACGTTTGATCATCTTTTTAGAAACGACGCTAAATCAAGTACAGGATGTAGTGAATCTCTTTCTTGATCAT
GTAGAAAATAGGTTAAAAAAACGATTCCCTGGGCTAATGATGTCGTGGGGAATCGCAGAACAACAGGCGGGGATTCGAAC
GTTCCATGATAGTTTCAATAATGCCAAAATTGCGTTAGATATAGGACGCCGGCAAATGGGGCCAGGCTATCGATACACTC
AAGTGAATACGAGCATTTTTCGCATTTTATTGCCCCTCTCTAAAAATCCCGATGTATTAGGAATAGTGTTATCTACCATC
GAACAATTAATTGACTATGACAACCATCGGGGAGGGGATCTCGTTCACACGCTAACTACTTATATTCGAAATCAAGGAAA
TATTAGCCAAACAGCTCGGGAACTTTGTGTTCATCGACACACTTTGTTGTACCGGTTAAAAAAAATTGAATCTCTGACCG
GGCGATCCTTGATGAATCCAGATGATCTCTTTTTGCTCGATCTTTGCATAAAGTTATGGATGATCGGGTTTGATCAGTCG
TAA

Upstream 100 bases:

>100_bases
TAGAAAGTATATGTCATTATAAAAGATTTACAAATGCACATCTACTCATTTGGAGTACGTGTGCTTTTATTATATGATAA
AAAGCCTGCTGGAGGTCATT

Downstream 100 bases:

>100_bases
TACACTAATGAGCATTCGTAACGATTCACGCCAAGTACACAGTAAAACATACAAATCAGGAGAGAAACGATGAGCATCTT
ATGACTCGTCAATTGCCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MWLSMKDVLDTEILSPAKVRTAIHRLENIPVEWVSVMEYPVEDYIRKNEFVLSTGIGCHEDIDVFRNFVLDVLHSGASAL
AIALGRYIKEIPMEIIHLAEKHGFPIIELPWNIRFSDIVQAVLSRLNHWHTHTMNHYEKIQKELLHLFLSDGTLSQAADI
IEQQIGTPVVIVDVHGVVKGKSKNSDSLMMKLESHVRPLSYHEVLDRSNNYAIDIDSLDVTDSILQASIRTTNQKTNGFL
LFEYSKAVRSDPVITKEQQYMLEYITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYHSWDYILSRAKSLGYNVNLPY
VCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVVLAGKWIHKEVMVTYQQERLIIFLETTLNQVQDVVNLFLDH
VENRLKKRFPGLMMSWGIAEQQAGIRTFHDSFNNAKIALDIGRRQMGPGYRYTQVNTSIFRILLPLSKNPDVLGIVLSTI
EQLIDYDNHRGGDLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNPDDLFLLDLCIKLWMIGFDQS

Sequences:

>Translated_560_residues
MWLSMKDVLDTEILSPAKVRTAIHRLENIPVEWVSVMEYPVEDYIRKNEFVLSTGIGCHEDIDVFRNFVLDVLHSGASAL
AIALGRYIKEIPMEIIHLAEKHGFPIIELPWNIRFSDIVQAVLSRLNHWHTHTMNHYEKIQKELLHLFLSDGTLSQAADI
IEQQIGTPVVIVDVHGVVKGKSKNSDSLMMKLESHVRPLSYHEVLDRSNNYAIDIDSLDVTDSILQASIRTTNQKTNGFL
LFEYSKAVRSDPVITKEQQYMLEYITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYHSWDYILSRAKSLGYNVNLPY
VCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVVLAGKWIHKEVMVTYQQERLIIFLETTLNQVQDVVNLFLDH
VENRLKKRFPGLMMSWGIAEQQAGIRTFHDSFNNAKIALDIGRRQMGPGYRYTQVNTSIFRILLPLSKNPDVLGIVLSTI
EQLIDYDNHRGGDLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNPDDLFLLDLCIKLWMIGFDQS
>Mature_560_residues
MWLSMKDVLDTEILSPAKVRTAIHRLENIPVEWVSVMEYPVEDYIRKNEFVLSTGIGCHEDIDVFRNFVLDVLHSGASAL
AIALGRYIKEIPMEIIHLAEKHGFPIIELPWNIRFSDIVQAVLSRLNHWHTHTMNHYEKIQKELLHLFLSDGTLSQAADI
IEQQIGTPVVIVDVHGVVKGKSKNSDSLMMKLESHVRPLSYHEVLDRSNNYAIDIDSLDVTDSILQASIRTTNQKTNGFL
LFEYSKAVRSDPVITKEQQYMLEYITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYHSWDYILSRAKSLGYNVNLPY
VCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVVLAGKWIHKEVMVTYQQERLIIFLETTLNQVQDVVNLFLDH
VENRLKKRFPGLMMSWGIAEQQAGIRTFHDSFNNAKIALDIGRRQMGPGYRYTQVNTSIFRILLPLSKNPDVLGIVLSTI
EQLIDYDNHRGGDLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNPDDLFLLDLCIKLWMIGFDQS

Specific function: Activates the expression of pucFG, pucH, pucI, pucJKLM and guaD, while it represses pucABCDE and its own expression [H]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CdaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012914 [H]

Pfam domain/function: PF07905 PucR [H]

EC number: NA

Molecular weight: Translated: 64722; Mature: 64722

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLSMKDVLDTEILSPAKVRTAIHRLENIPVEWVSVMEYPVEDYIRKNEFVLSTGIGCHE
CCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCEEEECCCCCCH
DIDVFRNFVLDVLHSGASALAIALGRYIKEIPMEIIHLAEKHGFPIIELPWNIRFSDIVQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
AVLSRLNHWHTHTMNHYEKIQKELLHLFLSDGTLSQAADIIEQQIGTPVVIVDVHGVVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECEEEEC
KSKNSDSLMMKLESHVRPLSYHEVLDRSNNYAIDIDSLDVTDSILQASIRTTNQKTNGFL
CCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEE
LFEYSKAVRSDPVITKEQQYMLEYITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYH
EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
SWDYILSRAKSLGYNVNLPYVCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVV
HHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LAGKWIHKEVMVTYQQERLIIFLETTLNQVQDVVNLFLDHVENRLKKRFPGLMMSWGIAE
HHHHHHHHHHHHEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHH
QQAGIRTFHDSFNNAKIALDIGRRQMGPGYRYTQVNTSIFRILLPLSKNPDVLGIVLSTI
HHCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHEECCCCCCCHHHHHHHHH
EQLIDYDNHRGGDLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNP
HHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DDLFLLDLCIKLWMIGFDQS
CHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWLSMKDVLDTEILSPAKVRTAIHRLENIPVEWVSVMEYPVEDYIRKNEFVLSTGIGCHE
CCCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHCCCCEEEECCCCCCH
DIDVFRNFVLDVLHSGASALAIALGRYIKEIPMEIIHLAEKHGFPIIELPWNIRFSDIVQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHH
AVLSRLNHWHTHTMNHYEKIQKELLHLFLSDGTLSQAADIIEQQIGTPVVIVDVHGVVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECEEEEC
KSKNSDSLMMKLESHVRPLSYHEVLDRSNNYAIDIDSLDVTDSILQASIRTTNQKTNGFL
CCCCCHHHHHHHHHHCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEE
LFEYSKAVRSDPVITKEQQYMLEYITTAVSLWFQKEMAIKETEWRLKDDFVWSLASGEYH
EEEECHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC
SWDYILSRAKSLGYNVNLPYVCVIGFAENLKSLFQKIKPNKITYEQWMPSMIRSIEEQVV
HHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LAGKWIHKEVMVTYQQERLIIFLETTLNQVQDVVNLFLDHVENRLKKRFPGLMMSWGIAE
HHHHHHHHHHHHEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHH
QQAGIRTFHDSFNNAKIALDIGRRQMGPGYRYTQVNTSIFRILLPLSKNPDVLGIVLSTI
HHCCHHHHHHCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHEECCCCCCCHHHHHHHHH
EQLIDYDNHRGGDLVHTLTTYIRNQGNISQTARELCVHRHTLLYRLKKIESLTGRSLMNP
HHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DDLFLLDLCIKLWMIGFDQS
CHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 11344136; 12029039 [H]