| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is spoVAB [H]
Identifier: 138895878
GI number: 138895878
Start: 2356579
End: 2357010
Strand: Reverse
Name: spoVAB [H]
Synonym: GTNG_2237
Alternate gene names: 138895878
Gene position: 2357010-2356579 (Counterclockwise)
Preceding gene: 138895879
Following gene: 138895877
Centisome position: 66.39
GC content: 50.46
Gene sequence:
>432_bases TTGACGACGCTTGAGATTTTGCTGGTAGTGTTCGTCGGCTTCGCTGGAGGGCTGGCGGTTGGAACGGGATTTGTCGCTTT TTTAGTCGTGCTTGGCGTCATTCCGCGTCTGACGCAGCTAACGAAAACGGTCAAGCGCATCCACGCGTATGAGTGGAGCG CCATTGCTGGTGCCATCGTCGGCGGCTGGATAAGTTTGCGTCATCCTGTCTGGCAGTTGTCGAAGTATTGGCTGGCGCCG ATCGGATTGCTACATGGCATATTTATCGGGATGCTCGCTGCGGCACTGACGGAAGTATTGAACGTTTGGCCGATTTTAGC GAAGCGCATTGGTGTTGATGATAAAATTGTCATTTTATTGATGGCGCTCGCCTTCGGAAAAGTGGCAGGTTCATTATTCC ATTGGGTTTATTTTGTCGATTACTTTCATTGA
Upstream 100 bases:
>100_bases AATGAAGAGCCTAGCCCTCTTGAAGTCGAAATGTTCAACTACCAGCAAGCCATTGATCAATACGTCATTTTGCATGAAAA CAAAGAAAGTATGAGACAGC
Downstream 100 bases:
>100_bases AAAAGGGGGGAGAAAACGTGGGATTAAAGGCGAATTACCTCCGTGAAGTGAAGGCGTTTCAGCCTTCTCCCCCATACGCC GCCAACGCGATCAAGGCGTT
Product: stage V sporulation protein AB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTTLEILLVVFVGFAGGLAVGTGFVAFLVVLGVIPRLTQLTKTVKRIHAYEWSAIAGAIVGGWISLRHPVWQLSKYWLAP IGLLHGIFIGMLAAALTEVLNVWPILAKRIGVDDKIVILLMALAFGKVAGSLFHWVYFVDYFH
Sequences:
>Translated_143_residues MTTLEILLVVFVGFAGGLAVGTGFVAFLVVLGVIPRLTQLTKTVKRIHAYEWSAIAGAIVGGWISLRHPVWQLSKYWLAP IGLLHGIFIGMLAAALTEVLNVWPILAKRIGVDDKIVILLMALAFGKVAGSLFHWVYFVDYFH >Mature_142_residues TTLEILLVVFVGFAGGLAVGTGFVAFLVVLGVIPRLTQLTKTVKRIHAYEWSAIAGAIVGGWISLRHPVWQLSKYWLAPI GLLHGIFIGMLAAALTEVLNVWPILAKRIGVDDKIVILLMALAFGKVAGSLFHWVYFVDYFH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020144 - ProDom: PD086170 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15687; Mature: 15556
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLEILLVVFVGFAGGLAVGTGFVAFLVVLGVIPRLTQLTKTVKRIHAYEWSAIAGAIV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGWISLRHPVWQLSKYWLAPIGLLHGIFIGMLAAALTEVLNVWPILAKRIGVDDKIVILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MALAFGKVAGSLFHWVYFVDYFH HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTLEILLVVFVGFAGGLAVGTGFVAFLVVLGVIPRLTQLTKTVKRIHAYEWSAIAGAIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGWISLRHPVWQLSKYWLAPIGLLHGIFIGMLAAALTEVLNVWPILAKRIGVDDKIVILL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH MALAFGKVAGSLFHWVYFVDYFH HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]