| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is spoVAC [H]
Identifier: 138895877
GI number: 138895877
Start: 2356133
End: 2356561
Strand: Reverse
Name: spoVAC [H]
Synonym: GTNG_2236
Alternate gene names: 138895877
Gene position: 2356561-2356133 (Counterclockwise)
Preceding gene: 138895878
Following gene: 138895876
Centisome position: 66.38
GC content: 59.67
Gene sequence:
>429_bases GTGGGATTAAAGGCGAATTACCTCCGTGAAGTGAAGGCGTTTCAGCCTTCTCCCCCATACGCCGCCAACGCGATCAAGGC GTTTCTTGTCGGCGGAGCGCTTTGCACGTTGGCGCAATGGCTTGCTGAGTGGCATAGCCGCCTGTTTGCTGTTTCGCCGT TTGCCGCTCAACTATGGGCGGTGACGGTGATGTCCGGGTTGGCGATCGTGTTGACGGCTGCCGGAAAATATGACGATTTC AGCCAGTTTGCCGGTGCGGGGGCGATGATGCTCATGACGGGACTGGCCAACGCCCTCGCCAGCGCGGCGATCGAGCATCG GAGCGAAGGATGGACGGCCGGGGTGGCTGGGCAGATGTTGAAAGCCGGCGGGGCAACGATTCTTTACGGCATCATTGTTG CCTATGTGCTCGGCCTCTTTTGGCCATGA
Upstream 100 bases:
>100_bases TCATTTTATTGATGGCGCTCGCCTTCGGAAAAGTGGCAGGTTCATTATTCCATTGGGTTTATTTTGTCGATTACTTTCAT TGAAAAAGGGGGGAGAAAAC
Downstream 100 bases:
>100_bases CGAAAAGAGGGAAGGACATGAAGCGTGTCGGAAAACAGACGTGGGTGTTTGATGAGGACATTTATATTAGAGCTGCTGCC ACCGCTGTCGGTCCGCTTGA
Product: stage V sporulation protein AC-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MGLKANYLREVKAFQPSPPYAANAIKAFLVGGALCTLAQWLAEWHSRLFAVSPFAAQLWAVTVMSGLAIVLTAAGKYDDF SQFAGAGAMMLMTGLANALASAAIEHRSEGWTAGVAGQMLKAGGATILYGIIVAYVLGLFWP
Sequences:
>Translated_142_residues MGLKANYLREVKAFQPSPPYAANAIKAFLVGGALCTLAQWLAEWHSRLFAVSPFAAQLWAVTVMSGLAIVLTAAGKYDDF SQFAGAGAMMLMTGLANALASAAIEHRSEGWTAGVAGQMLKAGGATILYGIIVAYVLGLFWP >Mature_141_residues GLKANYLREVKAFQPSPPYAANAIKAFLVGGALCTLAQWLAEWHSRLFAVSPFAAQLWAVTVMSGLAIVLTAAGKYDDFS QFAGAGAMMLMTGLANALASAAIEHRSEGWTAGVAGQMLKAGGATILYGIIVAYVLGLFWP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014203 - InterPro: IPR005562 [H]
Pfam domain/function: PF03862 SpoVA [H]
EC number: NA
Molecular weight: Translated: 14913; Mature: 14781
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLKANYLREVKAFQPSPPYAANAIKAFLVGGALCTLAQWLAEWHSRLFAVSPFAAQLWA CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VTVMSGLAIVLTAAGKYDDFSQFAGAGAMMLMTGLANALASAAIEHRSEGWTAGVAGQML HHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KAGGATILYGIIVAYVLGLFWP HHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GLKANYLREVKAFQPSPPYAANAIKAFLVGGALCTLAQWLAEWHSRLFAVSPFAAQLWA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VTVMSGLAIVLTAAGKYDDFSQFAGAGAMMLMTGLANALASAAIEHRSEGWTAGVAGQML HHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KAGGATILYGIIVAYVLGLFWP HHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3926949; 8969508; 9384377 [H]