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The map label for this gene is ypdA [H]

Identifier: 138895811

GI number: 138895811

Start: 2297854

End: 2298846

Strand: Reverse

Name: ypdA [H]

Synonym: GTNG_2170

Alternate gene names: 138895811

Gene position: 2298846-2297854 (Counterclockwise)

Preceding gene: 138895812

Following gene: 138895810

Centisome position: 64.75

GC content: 50.86

Gene sequence:

>993_bases
ATGAGAGAAGAAAAAATTATCATCGTTGGCGGCGGACCATGCGGACTGGCGGCGGCGATCGCTTTGCAGGACGCTGGGTT
TTCACCGCTTGTGATCGAAAAAGGGAATATCGTCCATGCGATTTACCGTTTTCCGACGCATCAAACGTTTTTCAGCACGA
GTGACCGGTTGGAGATCGGCGGCGTGCCGTTTATTACGGAAAATCGAAAGCCGACGAGAAGCCAGGCGCTCGCGTATTAC
CGCGAAGTCGTCGTCCGTAAACAAGTGCGCGTCAACACGTTTGAAGAAGTGAAAACCGTCAAGCAGCAAGAAGACGGGAC
TTTTTTGGTCGAAACGACAAAAGGCAAGTATCGCGCTCAATACATTGTCGTTGCCACCGGGTATTACGACCATCCAAACT
ATATGAATGTACCGGGGGAAGAGTTGCCGAAAGTAATGCATTATTTTAAAGAAGCGCATCCGTACTTCAACACCGACTGC
GTCGTTATTGGTGGGAAAAACTCGAGCGTCGATGCGGCGATGGAACTTGTGAAAGCTGGGGCGCGCGTCACGGTGCTGTA
TCGCGGCAGCGAGTATTCCAAAAGCATCAAACCGTGGATTTTGCCGGAGTTTGATGCATTGGTGCGCAAAGGCGTCATTC
GCATGGAATTTCACGCTCACGTGAAAGAAATTACGGAAGATGCTGTGACTTACGAAGTAAACGGGGAAACGAAAACGATC
AAAAACGATTTTGTGTTCGCCATGACTGGCTATCATCCCGACCATAGCTTTTTAACGAATATCGGCGTTCGCGTCGATCC
GGAAAGCGGACGGCCGCACTATGACCCAGAAACGATGGAGACAAACGTGCCGGGGGTGTTTATCGCAGGGGTGATCGCCG
CTGGTAATAATGCCAATGAAATTTTTATCGAAAACGGCCGTTTTCATGGCGATCACATCGCTGCCTGCATCGCCCAACGA
GAGCAGGAAGCATCGGCTCGGAAGCCGCTGTAA

Upstream 100 bases:

>100_bases
GCTGGGTGTAAACGCGGCGAGCACAGACGTTTGCATGCTGGAGTGAAATCCCCTATCATAAGATAGGGGATTTTTTGCTT
CGTGTGAGGTGACAAAAAAC

Downstream 100 bases:

>100_bases
CAACACCATTTGAGTGCGGTAGAAATTAGGCGGGCATCATGTTTAAAATCGGAAAGCGAAGGTGACGGATGTGACGAAAC
GGAAAGTAGTGCTGCTGACG

Product: thioredoxin reductase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MREEKIIIVGGGPCGLAAAIALQDAGFSPLVIEKGNIVHAIYRFPTHQTFFSTSDRLEIGGVPFITENRKPTRSQALAYY
REVVVRKQVRVNTFEEVKTVKQQEDGTFLVETTKGKYRAQYIVVATGYYDHPNYMNVPGEELPKVMHYFKEAHPYFNTDC
VVIGGKNSSVDAAMELVKAGARVTVLYRGSEYSKSIKPWILPEFDALVRKGVIRMEFHAHVKEITEDAVTYEVNGETKTI
KNDFVFAMTGYHPDHSFLTNIGVRVDPESGRPHYDPETMETNVPGVFIAGVIAAGNNANEIFIENGRFHGDHIAACIAQR
EQEASARKPL

Sequences:

>Translated_330_residues
MREEKIIIVGGGPCGLAAAIALQDAGFSPLVIEKGNIVHAIYRFPTHQTFFSTSDRLEIGGVPFITENRKPTRSQALAYY
REVVVRKQVRVNTFEEVKTVKQQEDGTFLVETTKGKYRAQYIVVATGYYDHPNYMNVPGEELPKVMHYFKEAHPYFNTDC
VVIGGKNSSVDAAMELVKAGARVTVLYRGSEYSKSIKPWILPEFDALVRKGVIRMEFHAHVKEITEDAVTYEVNGETKTI
KNDFVFAMTGYHPDHSFLTNIGVRVDPESGRPHYDPETMETNVPGVFIAGVIAAGNNANEIFIENGRFHGDHIAACIAQR
EQEASARKPL
>Mature_330_residues
MREEKIIIVGGGPCGLAAAIALQDAGFSPLVIEKGNIVHAIYRFPTHQTFFSTSDRLEIGGVPFITENRKPTRSQALAYY
REVVVRKQVRVNTFEEVKTVKQQEDGTFLVETTKGKYRAQYIVVATGYYDHPNYMNVPGEELPKVMHYFKEAHPYFNTDC
VVIGGKNSSVDAAMELVKAGARVTVLYRGSEYSKSIKPWILPEFDALVRKGVIRMEFHAHVKEITEDAVTYEVNGETKTI
KNDFVFAMTGYHPDHSFLTNIGVRVDPESGRPHYDPETMETNVPGVFIAGVIAAGNNANEIFIENGRFHGDHIAACIAQR
EQEASARKPL

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 36888; Mature: 36888

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS00496 PII_GLNB_UMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREEKIIIVGGGPCGLAAAIALQDAGFSPLVIEKGNIVHAIYRFPTHQTFFSTSDRLEIG
CCCCEEEEECCCCHHHHHEEEECCCCCCEEEEECCCEEEEEEECCCCCEEECCCCCEEEC
GVPFITENRKPTRSQALAYYREVVVRKQVRVNTFEEVKTVKQQEDGTFLVETTKGKYRAQ
CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE
YIVVATGYYDHPNYMNVPGEELPKVMHYFKEAHPYFNTDCVVIGGKNSSVDAAMELVKAG
EEEEEECEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
ARVTVLYRGSEYSKSIKPWILPEFDALVRKGVIRMEFHAHVKEITEDAVTYEVNGETKTI
CEEEEEEECCCCCCCCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHCCEEEEECCCEEEE
KNDFVFAMTGYHPDHSFLTNIGVRVDPESGRPHYDPETMETNVPGVFIAGVIAAGNNANE
ECCEEEEEECCCCCHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
IFIENGRFHGDHIAACIAQREQEASARKPL
EEEECCEECCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MREEKIIIVGGGPCGLAAAIALQDAGFSPLVIEKGNIVHAIYRFPTHQTFFSTSDRLEIG
CCCCEEEEECCCCHHHHHEEEECCCCCCEEEEECCCEEEEEEECCCCCEEECCCCCEEEC
GVPFITENRKPTRSQALAYYREVVVRKQVRVNTFEEVKTVKQQEDGTFLVETTKGKYRAQ
CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCCCEEEE
YIVVATGYYDHPNYMNVPGEELPKVMHYFKEAHPYFNTDCVVIGGKNSSVDAAMELVKAG
EEEEEECEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
ARVTVLYRGSEYSKSIKPWILPEFDALVRKGVIRMEFHAHVKEITEDAVTYEVNGETKTI
CEEEEEEECCCCCCCCCCCCCCCHHHHHHCCEEEEHHHHHHHHHHHCCEEEEECCCEEEE
KNDFVFAMTGYHPDHSFLTNIGVRVDPESGRPHYDPETMETNVPGVFIAGVIAAGNNANE
ECCEEEEEECCCCCHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCE
IFIENGRFHGDHIAACIAQREQEASARKPL
EEEECCEECCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]