| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is 138895719
Identifier: 138895719
GI number: 138895719
Start: 2206061
End: 2206939
Strand: Reverse
Name: 138895719
Synonym: GTNG_2075
Alternate gene names: NA
Gene position: 2206939-2206061 (Counterclockwise)
Preceding gene: 138895720
Following gene: 138895718
Centisome position: 62.16
GC content: 47.33
Gene sequence:
>879_bases ATGCAAGAGCACTTTCATTTTACAACAGATCGAGCCAAACTTCAAAAACAATATGTATCGATTTTGTGTTTTGTATCAGC TCAACTATCGAGTATCCAGATTCATCTTCAACGTCGAAATCTTCATTTGTTGAAACAGAAGGACGAGGTCATCATCGCCG TCCATGTCCTTGGAAAGTTGTTAGGCTTCACTTCCGAACGGGCTTGGCATCGGTTTGTGATCGGGAATTTGTTTTCCAAG GACTTGTTCCCTGAACGTTCTCGATACAACCGTCACTGCCGAGCGCTTGGCTTTGCGATCAAGTGGATGCGGCACCAGCT GGCCAAGCGCGGGCAGCACCATGCGTATGCGGTCGTGGACAGTTTGCCGATCGAGCTGTGTCATTCATCCCGAATGTATC GCGCCAAACGGTTTCGTGGAATTGCGGATATTGGCTATTGTGCTTCGAAAAAGATCGCTTTCTATGGGTTGAAACTTCAT CTGCAGGTCACCGACCAAGGGCTTCCGATGGGATATGTCGTCACTGAAGCGTCTTGTCACGATCGGGTGGCCGCTGAAAC CGTCATGACGCAAATTCCACATCCATATAACCTAGGTGACAAAGGGTACATCAGCCAAAAACTGCAAAAGAAGCTGTACG AAGAGCATCGAGTCGCTTTTTGGACGCCCGTTCGAAAAAATCAGCGAATTCTCCAATCCGACGCATGGAAACAGTGGATG AAACGAAAACGCAAAGTGATTGAAACCGTGTTTTCGATTTTAGTCGATTCGTATCGGATCACCGAGATTCGAGCGAACTC GGTTTCTGGATTTGAAACGGCACTGGATGGTATTTTACTGGCTTACTCCCTTGTTGTTCTTGGGCTAGTTGAGCGTTAA
Upstream 100 bases:
>100_bases CCCGTGGTGCTAGATAAAATCAGACAAGCATAAAAATAGCCCTTGCATGAGGATCTCCTTAAAATGAAAGTGCGACCAAA CATTTAAAAGGAGAATTCAC
Downstream 100 bases:
>100_bases GACTCAACTAGCACCACGGGTATATATTTATTATTTATTTATATTTATTAATTTAACTAATTAGTGTCTAAATTAGTTTA ACTAATTAGTTTCTAACTCA
Product: putative transposase
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; Transposase For Insertion Sequence Element; IS4 Family Transposase; Membrane-Associated Metal-Dependent Hydrolase; Transposase And Inactivated Derivatives IS5 Family; Transposase Family Protein; Transposase IS
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MQEHFHFTTDRAKLQKQYVSILCFVSAQLSSIQIHLQRRNLHLLKQKDEVIIAVHVLGKLLGFTSERAWHRFVIGNLFSK DLFPERSRYNRHCRALGFAIKWMRHQLAKRGQHHAYAVVDSLPIELCHSSRMYRAKRFRGIADIGYCASKKIAFYGLKLH LQVTDQGLPMGYVVTEASCHDRVAAETVMTQIPHPYNLGDKGYISQKLQKKLYEEHRVAFWTPVRKNQRILQSDAWKQWM KRKRKVIETVFSILVDSYRITEIRANSVSGFETALDGILLAYSLVVLGLVER
Sequences:
>Translated_292_residues MQEHFHFTTDRAKLQKQYVSILCFVSAQLSSIQIHLQRRNLHLLKQKDEVIIAVHVLGKLLGFTSERAWHRFVIGNLFSK DLFPERSRYNRHCRALGFAIKWMRHQLAKRGQHHAYAVVDSLPIELCHSSRMYRAKRFRGIADIGYCASKKIAFYGLKLH LQVTDQGLPMGYVVTEASCHDRVAAETVMTQIPHPYNLGDKGYISQKLQKKLYEEHRVAFWTPVRKNQRILQSDAWKQWM KRKRKVIETVFSILVDSYRITEIRANSVSGFETALDGILLAYSLVVLGLVER >Mature_292_residues MQEHFHFTTDRAKLQKQYVSILCFVSAQLSSIQIHLQRRNLHLLKQKDEVIIAVHVLGKLLGFTSERAWHRFVIGNLFSK DLFPERSRYNRHCRALGFAIKWMRHQLAKRGQHHAYAVVDSLPIELCHSSRMYRAKRFRGIADIGYCASKKIAFYGLKLH LQVTDQGLPMGYVVTEASCHDRVAAETVMTQIPHPYNLGDKGYISQKLQKKLYEEHRVAFWTPVRKNQRILQSDAWKQWM KRKRKVIETVFSILVDSYRITEIRANSVSGFETALDGILLAYSLVVLGLVER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33965; Mature: 33965
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEHFHFTTDRAKLQKQYVSILCFVSAQLSSIQIHLQRRNLHLLKQKDEVIIAVHVLGKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHEECCCCEEEHHHHHHHH LGFTSERAWHRFVIGNLFSKDLFPERSRYNRHCRALGFAIKWMRHQLAKRGQHHAYAVVD HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH SLPIELCHSSRMYRAKRFRGIADIGYCASKKIAFYGLKLHLQVTDQGLPMGYVVTEASCH HHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEEEEECCCCCCEEEEECCCHH DRVAAETVMTQIPHPYNLGDKGYISQKLQKKLYEEHRVAFWTPVRKNQRILQSDAWKQWM HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH KRKRKVIETVFSILVDSYRITEIRANSVSGFETALDGILLAYSLVVLGLVER HHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQEHFHFTTDRAKLQKQYVSILCFVSAQLSSIQIHLQRRNLHLLKQKDEVIIAVHVLGKL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHEECCCCEEEHHHHHHHH LGFTSERAWHRFVIGNLFSKDLFPERSRYNRHCRALGFAIKWMRHQLAKRGQHHAYAVVD HCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHH SLPIELCHSSRMYRAKRFRGIADIGYCASKKIAFYGLKLHLQVTDQGLPMGYVVTEASCH HHHHHHHHCHHHHHHHHHCCCHHHHHHHCCCEEEEEEEEEEEEECCCCCCEEEEECCCHH DRVAAETVMTQIPHPYNLGDKGYISQKLQKKLYEEHRVAFWTPVRKNQRILQSDAWKQWM HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHH KRKRKVIETVFSILVDSYRITEIRANSVSGFETALDGILLAYSLVVLGLVER HHHHHHHHHHHHHHHCCHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA