| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138895718
Identifier: 138895718
GI number: 138895718
Start: 2203659
End: 2205281
Strand: Reverse
Name: 138895718
Synonym: GTNG_2074
Alternate gene names: NA
Gene position: 2205281-2203659 (Counterclockwise)
Preceding gene: 138895719
Following gene: 138895715
Centisome position: 62.12
GC content: 53.23
Gene sequence:
>1623_bases GTGGCGTATCTCCAGCTTGCTCACAACGAATGGGATCCGAAGGCCAAATATGCGAAAGCGAAGGTGATTTATTCGTTTGG GCGCGAAGACGAGGTGGATCGCGCTGTCTTGGAGCGTCTGGCCAAAAGCATTTCGCGATTCCTTTCTCCTGAGCAGGCTT GGGAAATCGAGACGTTGACAGGAGAAGTGTCGGATGACTTTCAGTTTCAATCAAGCAAACGCCTTGGTGGCGCTTGGCTT TTGGATCAGCTCTGGAGACAACTGGGATTGGGAGAGATTCTCCACTCCTTGTTTGCCTCCCGACATCATCAGATTCCGTT GGAACGGCTGATTTTTGCCATGGTGGCGAATCGTGCCCTTCATCCGTCAAGCAAGTTGGCGATGGAGGAGTGGGTGGAGA AAGACGTGCATATCCCTCATCTTCCCCAAGGCGCCAGCCACCAGTTGTACCGGGCGATGGATGAGCTGCTGGCTGTGCAG CCGGAATTGGAACGCCAAGTGTTCCATGCCGTGGCCGATTTATTGAACCTGGAAGTCGATTTGATTTACTTTGATACGAC TTCGTCGTACTTCGAAGTGGATCCATCCGAAACACCAGAAGGAGAATCGCTTCGAAAGCAGGGGTTTTCCAAAGATAAGC GTCCCGATTTGGTCCAAATCGTCATTGGACTGGCCGTTACCCGGGAAGGAGTCCCCATTCGCGCTTGGGTATGGCCTGGC AATACGATGGATATGACGGTCATCAAACAGGTGAAACAAGACTTGATTGGCTGGAAGCTTGGGCGTGTGATCAGCGTGAT GGACCGCGGATTTTCGTCTGAAGAGAATTTGCGAATCTTGCAACAGGCCGGGGGACACTACATTGTCGGCGAAAAAATGC GGTCCGGCAAAGCCGCCGTCGAAGAGGCCCTAAACCGTCGCGGGCGCTACCAACAAGTTCGCGAGAACTTGCATATCAAA GAAATCATCGTGGGCGACGGAGAAGCGCGTCAGCGCTATGTTCTCGTGTACAATCCCAGCGAAGCCGAACGCCAACGCAA GGAACGGGAAAAGCTGCTCGAATCGCTGAAAGAGGAGTTGGAGGGGCTTCGCCAACTCCCCAATGAAGCTCATCATAAGG CCACCTGCCGGCTGCGTTCCCATCCGTCCTACGGAAAATACTTGCGTCAATTGAAGGATGGAACGCTTCGCATCGACAAG CAAGCGGTTCGTGAAGCGGAAAAGTACGATGGCAAATATCTCATCCGAACCTCCGATGACACCTTGTCTGCCGAGGATGT CGCGCTCGGGTATAAGCAACTGGTGGATATCGAGCAGGCCTTTCGGACGTTGAAATCAACACTCGAGCTGCGCCCCATGT ATCATCGCTTGGAAGACCGTATCCGGGCGCATGTGCTGCTCAGTTGGCTGGCTCTCTTGCTGGTTCGGATCGTGGAGATC CGAACTCATGAATCGTGGCCGAAAGTAAGAGACGAATGCGAGCGTCTCATGCTTGGACATTTTTCTTCAAAAAACGGCGA CCTTTATCAACGAACCGAACTGACGGCCAAACAAGCGCTATTCCTTGCGGCTCTAGGGCTGGAACCTCCTCCAAAGATTC TAGGCATCCACCCTCGCACCTAG
Upstream 100 bases:
>100_bases CACGACTTGTTTATTTTAACTTTTAAAACAGCTGAATATCGGTTATAATATAGGCATGTACATACGGCGAGTAACACGCA AAAACAAAGATGGAACGACC
Downstream 100 bases:
>100_bases ATACACGCCCGAAGTGTGCCCAAATGCCTCCGATCCCTTTTGTATCAAGGGGCGAGAGGCATTTTGTTTGCCTAGTGACT GTCGAACTCGGGGATATGTT
Product: transposase
Products: NA
Alternate protein names: Transposase; Transposase-Like Protein; Transposase Is4 Family Protein; Transposase For Insertion Sequence Element; IS4 Family Transposase; ISMbov3 Transposase; Transposase Undefined; ISMHp1 Transposase; Transposase IS4 Family; Transposase Family Protein; LOW QUALITY PROTEIN Transposase IS4 Family Protein
Number of amino acids: Translated: 540; Mature: 539
Protein sequence:
>540_residues MAYLQLAHNEWDPKAKYAKAKVIYSFGREDEVDRAVLERLAKSISRFLSPEQAWEIETLTGEVSDDFQFQSSKRLGGAWL LDQLWRQLGLGEILHSLFASRHHQIPLERLIFAMVANRALHPSSKLAMEEWVEKDVHIPHLPQGASHQLYRAMDELLAVQ PELERQVFHAVADLLNLEVDLIYFDTTSSYFEVDPSETPEGESLRKQGFSKDKRPDLVQIVIGLAVTREGVPIRAWVWPG NTMDMTVIKQVKQDLIGWKLGRVISVMDRGFSSEENLRILQQAGGHYIVGEKMRSGKAAVEEALNRRGRYQQVRENLHIK EIIVGDGEARQRYVLVYNPSEAERQRKEREKLLESLKEELEGLRQLPNEAHHKATCRLRSHPSYGKYLRQLKDGTLRIDK QAVREAEKYDGKYLIRTSDDTLSAEDVALGYKQLVDIEQAFRTLKSTLELRPMYHRLEDRIRAHVLLSWLALLLVRIVEI RTHESWPKVRDECERLMLGHFSSKNGDLYQRTELTAKQALFLAALGLEPPPKILGIHPRT
Sequences:
>Translated_540_residues MAYLQLAHNEWDPKAKYAKAKVIYSFGREDEVDRAVLERLAKSISRFLSPEQAWEIETLTGEVSDDFQFQSSKRLGGAWL LDQLWRQLGLGEILHSLFASRHHQIPLERLIFAMVANRALHPSSKLAMEEWVEKDVHIPHLPQGASHQLYRAMDELLAVQ PELERQVFHAVADLLNLEVDLIYFDTTSSYFEVDPSETPEGESLRKQGFSKDKRPDLVQIVIGLAVTREGVPIRAWVWPG NTMDMTVIKQVKQDLIGWKLGRVISVMDRGFSSEENLRILQQAGGHYIVGEKMRSGKAAVEEALNRRGRYQQVRENLHIK EIIVGDGEARQRYVLVYNPSEAERQRKEREKLLESLKEELEGLRQLPNEAHHKATCRLRSHPSYGKYLRQLKDGTLRIDK QAVREAEKYDGKYLIRTSDDTLSAEDVALGYKQLVDIEQAFRTLKSTLELRPMYHRLEDRIRAHVLLSWLALLLVRIVEI RTHESWPKVRDECERLMLGHFSSKNGDLYQRTELTAKQALFLAALGLEPPPKILGIHPRT >Mature_539_residues AYLQLAHNEWDPKAKYAKAKVIYSFGREDEVDRAVLERLAKSISRFLSPEQAWEIETLTGEVSDDFQFQSSKRLGGAWLL DQLWRQLGLGEILHSLFASRHHQIPLERLIFAMVANRALHPSSKLAMEEWVEKDVHIPHLPQGASHQLYRAMDELLAVQP ELERQVFHAVADLLNLEVDLIYFDTTSSYFEVDPSETPEGESLRKQGFSKDKRPDLVQIVIGLAVTREGVPIRAWVWPGN TMDMTVIKQVKQDLIGWKLGRVISVMDRGFSSEENLRILQQAGGHYIVGEKMRSGKAAVEEALNRRGRYQQVRENLHIKE IIVGDGEARQRYVLVYNPSEAERQRKEREKLLESLKEELEGLRQLPNEAHHKATCRLRSHPSYGKYLRQLKDGTLRIDKQ AVREAEKYDGKYLIRTSDDTLSAEDVALGYKQLVDIEQAFRTLKSTLELRPMYHRLEDRIRAHVLLSWLALLLVRIVEIR THESWPKVRDECERLMLGHFSSKNGDLYQRTELTAKQALFLAALGLEPPPKILGIHPRT
Specific function: Unknown
COG id: COG5421
COG function: function code L; Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62266; Mature: 62135
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYLQLAHNEWDPKAKYAKAKVIYSFGREDEVDRAVLERLAKSISRFLSPEQAWEIETLT CCEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCEEEEEC GEVSDDFQFQSSKRLGGAWLLDQLWRQLGLGEILHSLFASRHHQIPLERLIFAMVANRAL CCCCCCCHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC HPSSKLAMEEWVEKDVHIPHLPQGASHQLYRAMDELLAVQPELERQVFHAVADLLNLEVD CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE LIYFDTTSSYFEVDPSETPEGESLRKQGFSKDKRPDLVQIVIGLAVTREGVPIRAWVWPG EEEEECCCCEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC NTMDMTVIKQVKQDLIGWKLGRVISVMDRGFSSEENLRILQQAGGHYIVGEKMRSGKAAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCHHHCCHHHH EEALNRRGRYQQVRENLHIKEIIVGDGEARQRYVLVYNPSEAERQRKEREKLLESLKEEL HHHHHHCCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH EGLRQLPNEAHHKATCRLRSHPSYGKYLRQLKDGTLRIDKQAVREAEKYDGKYLIRTSDD HHHHHCCHHHCCHHHEEECCCCCHHHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCC TLSAEDVALGYKQLVDIEQAFRTLKSTLELRPMYHRLEDRIRAHVLLSWLALLLVRIVEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTHESWPKVRDECERLMLGHFSSKNGDLYQRTELTAKQALFLAALGLEPPPKILGIHPRT HCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC >Mature Secondary Structure AYLQLAHNEWDPKAKYAKAKVIYSFGREDEVDRAVLERLAKSISRFLSPEQAWEIETLT CEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHCCEEEEEC GEVSDDFQFQSSKRLGGAWLLDQLWRQLGLGEILHSLFASRHHQIPLERLIFAMVANRAL CCCCCCCHHCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC HPSSKLAMEEWVEKDVHIPHLPQGASHQLYRAMDELLAVQPELERQVFHAVADLLNLEVD CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE LIYFDTTSSYFEVDPSETPEGESLRKQGFSKDKRPDLVQIVIGLAVTREGVPIRAWVWPG EEEEECCCCEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCC NTMDMTVIKQVKQDLIGWKLGRVISVMDRGFSSEENLRILQQAGGHYIVGEKMRSGKAAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCHHHCCHHHH EEALNRRGRYQQVRENLHIKEIIVGDGEARQRYVLVYNPSEAERQRKEREKLLESLKEEL HHHHHHCCHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH EGLRQLPNEAHHKATCRLRSHPSYGKYLRQLKDGTLRIDKQAVREAEKYDGKYLIRTSDD HHHHHCCHHHCCHHHEEECCCCCHHHHHHHHCCCCEEECHHHHHHHHHCCCEEEEEECCC TLSAEDVALGYKQLVDIEQAFRTLKSTLELRPMYHRLEDRIRAHVLLSWLALLLVRIVEI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTHESWPKVRDECERLMLGHFSSKNGDLYQRTELTAKQALFLAALGLEPPPKILGIHPRT HCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA