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The map label for this gene is yrkE [H]

Identifier: 138895629

GI number: 138895629

Start: 2101592

End: 2102074

Strand: Reverse

Name: yrkE [H]

Synonym: GTNG_1982

Alternate gene names: 138895629

Gene position: 2102074-2101592 (Counterclockwise)

Preceding gene: 138895630

Following gene: 138895628

Centisome position: 59.21

GC content: 51.76

Gene sequence:

>483_bases
ATGACACAGCTGAAGAAAAAGACGACGATCATCTTGTTCAGCGGCGACTATGACAAAGCAATGGCTGCTTACATCATCGC
CAACGGCGCCGCGGCTTACGATCATGACGTGACGATTTTCCATACGTTTTGGGGGCTGAACGCCTTGCGGAAAGAGGCAC
CCGTTCCGGTGCAAAAAGGGTTTCTTGAAAAGATGTTCGCCAAAATGATGCCGCGCGGCGCCGACCGCATGGGATTGTCG
CGCATGAATTTTGCCGGCATCGGCCCGAAGCTGATCAAAAAGGTAATCAAAAAGCATAACGCCATGCCGCTTCCGCAGCT
GATCGAGATGGCGAAAGAGCAGGGTGTGAAGCTTGTCGCCTGTCAAATGACGGTCGATTTGCTTGGGCTGAAACCGGAAG
AATTGATCGACGGCATTGAGTTTGCGGGGGTGGCTGCGTATTTGGCTGATGCTTCCGAAGGAAATGTGAACCTATTCATT
TAA

Upstream 100 bases:

>100_bases
TGATATGAAAGAAGAAAATGGCGTGTTGATGTTCTGGATTCAAAAAGGATAATTTTTATTGGTTTATATACCCGTATAGG
TATATGAAGGAGGCAACGAG

Downstream 100 bases:

>100_bases
TCATCTTAACTCGCGAGGGAATCGTATGGTACAAACAGTGATCAACATTATCCTGTTCGCTTTGCTTGCTTGGTTTCTCG
CTAGTCGTTTCATTCCCCCG

Product: NADH dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTQLKKKTTIILFSGDYDKAMAAYIIANGAAAYDHDVTIFHTFWGLNALRKEAPVPVQKGFLEKMFAKMMPRGADRMGLS
RMNFAGIGPKLIKKVIKKHNAMPLPQLIEMAKEQGVKLVACQMTVDLLGLKPEELIDGIEFAGVAAYLADASEGNVNLFI

Sequences:

>Translated_160_residues
MTQLKKKTTIILFSGDYDKAMAAYIIANGAAAYDHDVTIFHTFWGLNALRKEAPVPVQKGFLEKMFAKMMPRGADRMGLS
RMNFAGIGPKLIKKVIKKHNAMPLPQLIEMAKEQGVKLVACQMTVDLLGLKPEELIDGIEFAGVAAYLADASEGNVNLFI
>Mature_159_residues
TQLKKKTTIILFSGDYDKAMAAYIIANGAAAYDHDVTIFHTFWGLNALRKEAPVPVQKGFLEKMFAKMMPRGADRMGLSR
MNFAGIGPKLIKKVIKKHNAMPLPQLIEMAKEQGVKLVACQMTVDLLGLKPEELIDGIEFAGVAAYLADASEGNVNLFI

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 17587; Mature: 17456

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQLKKKTTIILFSGDYDKAMAAYIIANGAAAYDHDVTIFHTFWGLNALRKEAPVPVQKG
CCCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHH
FLEKMFAKMMPRGADRMGLSRMNFAGIGPKLIKKVIKKHNAMPLPQLIEMAKEQGVKLVA
HHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEE
CQMTVDLLGLKPEELIDGIEFAGVAAYLADASEGNVNLFI
EEEHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
TQLKKKTTIILFSGDYDKAMAAYIIANGAAAYDHDVTIFHTFWGLNALRKEAPVPVQKG
CCCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCHHHH
FLEKMFAKMMPRGADRMGLSRMNFAGIGPKLIKKVIKKHNAMPLPQLIEMAKEQGVKLVA
HHHHHHHHHCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEE
CQMTVDLLGLKPEELIDGIEFAGVAAYLADASEGNVNLFI
EEEHHHHHCCCHHHHHCCHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]