Click here to switch to the map view.

The map label for this gene is yrkF [H]

Identifier: 138895628

GI number: 138895628

Start: 2101201

End: 2101566

Strand: Reverse

Name: yrkF [H]

Synonym: GTNG_1981

Alternate gene names: 138895628

Gene position: 2101566-2101201 (Counterclockwise)

Preceding gene: 138895629

Following gene: 138895627

Centisome position: 59.19

GC content: 48.63

Gene sequence:

>366_bases
ATGGTACAAACAGTGATCAACATTATCCTGTTCGCTTTGCTTGCTTGGTTTCTCGCTAGTCGTTTCATTCCCCCGAAAGG
AGTGCAGATGATCACAACGGCGGAGTTAAAGCGGCGATTGAAACAATCTGGTGTGCAATATATTGACGTGCGCACTCCGA
TGGAGTTTCGTTCTTTCCACTTGCCGGGCTTTCGCAACATCCCGCTGCACGAATTGGCTGCACGCGCTCGCGAACTATCG
AAAGAAAAAGAAGTGGTGGTCATTTGCCAAAGCGGGATGCGAAGCCAAAAAGCAAGCAAATGGTTAAAGAAAATGGGATT
TCAGCATGTGACGAACGTCAAAGGCGGCTTAAACGCCTGGCAGTAG

Upstream 100 bases:

>100_bases
GACGGCATTGAGTTTGCGGGGGTGGCTGCGTATTTGGCTGATGCTTCCGAAGGAAATGTGAACCTATTCATTTAATCATC
TTAACTCGCGAGGGAATCGT

Downstream 100 bases:

>100_bases
AGGAGGATGACGATGAAAACCATTACGCCGAAAGAGGTGGAAGAACGGCTTCGTGCCGGAGAGTCACTTCGGATCATTGA
CGTGCGCGAGCCGGATGAAG

Product: rhodanese-related sulfurtransferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MVQTVINIILFALLAWFLASRFIPPKGVQMITTAELKRRLKQSGVQYIDVRTPMEFRSFHLPGFRNIPLHELAARARELS
KEKEVVVICQSGMRSQKASKWLKKMGFQHVTNVKGGLNAWQ

Sequences:

>Translated_121_residues
MVQTVINIILFALLAWFLASRFIPPKGVQMITTAELKRRLKQSGVQYIDVRTPMEFRSFHLPGFRNIPLHELAARARELS
KEKEVVVICQSGMRSQKASKWLKKMGFQHVTNVKGGLNAWQ
>Mature_121_residues
MVQTVINIILFALLAWFLASRFIPPKGVQMITTAELKRRLKQSGVQYIDVRTPMEFRSFHLPGFRNIPLHELAARARELS
KEKEVVVICQSGMRSQKASKWLKKMGFQHVTNVKGGLNAWQ

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 13894; Mature: 13894

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQTVINIILFALLAWFLASRFIPPKGVQMITTAELKRRLKQSGVQYIDVRTPMEFRSFH
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCC
LPGFRNIPLHELAARARELSKEKEVVVICQSGMRSQKASKWLKKMGFQHVTNVKGGLNAW
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHCCCCCCCC
Q
C
>Mature Secondary Structure
MVQTVINIILFALLAWFLASRFIPPKGVQMITTAELKRRLKQSGVQYIDVRTPMEFRSFH
CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHCC
LPGFRNIPLHELAARARELSKEKEVVVICQSGMRSQKASKWLKKMGFQHVTNVKGGLNAW
CCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCHHHHHHCCCCCCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]