Click here to switch to the map view.

The map label for this gene is yiaN [H]

Identifier: 138895591

GI number: 138895591

Start: 2067928

End: 2069214

Strand: Reverse

Name: yiaN [H]

Synonym: GTNG_1944

Alternate gene names: 138895591

Gene position: 2069214-2067928 (Counterclockwise)

Preceding gene: 138895592

Following gene: 138895589

Centisome position: 58.28

GC content: 53.77

Gene sequence:

>1287_bases
ATGGCATTGGTAGTATTTGTCGGATCGCTGCTCGGCGTGATGGCGCTTGGGCTGCCGATCGCGTTTGCGTTGCTCGTCAG
CGGGGTTGCACTCATGTTTTATCTGAATATTTTTGATACACAAATCATAGCTCAAAACTTAATCAGCGGGGCGGACAGCT
TTCCGCTGATGGCCATTCCGTTCTTTATTCTCGCTGGGGAGTTGATGAACGCTGGTGGCATTTCAAAGCGGATCGTCCGC
TTTGCCTTGGCGCTTGTCGGCCACATCCGCGGTGGGTTGGGGTATGTTGCCATTATCGCTGGCGTTTTATTTGCCGGTCT
GTCTGGTTCAGCGGTAGCTGACACGGCAGCGCTCGGCGCCATTCTCATCCCGATGATGGTCAAGGCTGGATACAATCGCA
ACCGTTCGACAGGCCTCATTGCCGCCGGGGGCATCATTGCTCCGATCATTCCGCCGAGCATTCCGATGATCCTTTTCGGG
GTGACTAGCGGGGTGTCGATTACGAAACTGTTTATGGCCGGCATCGTCCCAGGCATTTTGCTTGGGATTATCTTGGCGGT
TTGCTGGTGGCTGGTGACCCGGAGAGATCAATTGGAAGTGCTTCCACGCCAGTCGGCGAAAGAGATTTGGCAGGCGGCTC
GTGAAGCGTTTTGGGCGCTGTTGTTGCCGGTGATTATCGTCGGTGGGCTTCGCGGAGGGGTGTTTACGCCGACAGAGGCT
GCGGTAGTAGCCGCCTTTTACGCCCTGTTTGTCGGTTTGTGCATTTACCGGGAACTGAAAGTCCGGAATTTGTTCCATGT
GCTCGTGGCCGCGTCAAAAACGACGAGCGTCGTCATGTTTTTGGTGGCAGCAGCTATGGTGTCAGCGTGGCTGATCACAG
TTGCCAATATTCCGTCCATTGTCACGGATGTGTTGGCGCCGTTTATAGAACATCCGTTGGTGCTTTTGTTAGCCATTAAT
GCGCTGGTGTTGTTGGTCGGGACGGCGATGGATTTGACGCCGACGGTGCTTATTTTAACTCCGGTGCTTATGCCGATTAT
CGAAAAAGCAGGGATCGATCCGGTGTATTTCGGGGTGCTGTTTATTCTAAACTGCAGCATCGGGTTGCTCACCCCGCCGG
TTGGTACGGTGCTAAACGTCGCCTGCGGAGTCGGGAAAATCGGGATGGAAGACATTCTGAAGGGGATTTGGCCGTTCTTA
TTAGCGGAAACGCTTTTGCTTCTGTTGCTCATTTTCTTCCCATCGCTCGTCACCGTGCCACTTGAGTGGTTTACTACAGG
TCACTGA

Upstream 100 bases:

>100_bases
GACGAGAATGAAAGAATCGGAAGAAGAAATTATGGAGGCAGCTCATGGGGAGATGACGAAATGGCATCAAAAACAAGGCG
CCGTCGGAGGTGAGAGGTAG

Downstream 100 bases:

>100_bases
GATCGTGAGAGAGGAAAGAAATAAAGACGTGATAAGATAGGCAGCTGTACTAATATGTGAGTGAACAAGAGGCAAAGCAT
CATGAAAAAACGCCTTGGCC

Product: ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MALVVFVGSLLGVMALGLPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIPFFILAGELMNAGGISKRIVR
FALALVGHIRGGLGYVAIIAGVLFAGLSGSAVADTAALGAILIPMMVKAGYNRNRSTGLIAAGGIIAPIIPPSIPMILFG
VTSGVSITKLFMAGIVPGILLGIILAVCWWLVTRRDQLEVLPRQSAKEIWQAAREAFWALLLPVIIVGGLRGGVFTPTEA
AVVAAFYALFVGLCIYRELKVRNLFHVLVAASKTTSVVMFLVAAAMVSAWLITVANIPSIVTDVLAPFIEHPLVLLLAIN
ALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVLFILNCSIGLLTPPVGTVLNVACGVGKIGMEDILKGIWPFL
LAETLLLLLLIFFPSLVTVPLEWFTTGH

Sequences:

>Translated_428_residues
MALVVFVGSLLGVMALGLPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIPFFILAGELMNAGGISKRIVR
FALALVGHIRGGLGYVAIIAGVLFAGLSGSAVADTAALGAILIPMMVKAGYNRNRSTGLIAAGGIIAPIIPPSIPMILFG
VTSGVSITKLFMAGIVPGILLGIILAVCWWLVTRRDQLEVLPRQSAKEIWQAAREAFWALLLPVIIVGGLRGGVFTPTEA
AVVAAFYALFVGLCIYRELKVRNLFHVLVAASKTTSVVMFLVAAAMVSAWLITVANIPSIVTDVLAPFIEHPLVLLLAIN
ALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVLFILNCSIGLLTPPVGTVLNVACGVGKIGMEDILKGIWPFL
LAETLLLLLLIFFPSLVTVPLEWFTTGH
>Mature_427_residues
ALVVFVGSLLGVMALGLPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIPFFILAGELMNAGGISKRIVRF
ALALVGHIRGGLGYVAIIAGVLFAGLSGSAVADTAALGAILIPMMVKAGYNRNRSTGLIAAGGIIAPIIPPSIPMILFGV
TSGVSITKLFMAGIVPGILLGIILAVCWWLVTRRDQLEVLPRQSAKEIWQAAREAFWALLLPVIIVGGLRGGVFTPTEAA
VVAAFYALFVGLCIYRELKVRNLFHVLVAASKTTSVVMFLVAAAMVSAWLITVANIPSIVTDVLAPFIEHPLVLLLAINA
LVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVLFILNCSIGLLTPPVGTVLNVACGVGKIGMEDILKGIWPFLL
AETLLLLLLIFFPSLVTVPLEWFTTGH

Specific function: Part of the tripartite ATP-independent periplasmic (TRAP) transport system yiaMNO involved in the uptake of 2,3- diketo-L-gulonate [H]

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=423, Percent_Identity=59.5744680851064, Blast_Score=459, Evalue=1e-130,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45187; Mature: 45055

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVVFVGSLLGVMALGLPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FFILAGELMNAGGISKRIVRFALALVGHIRGGLGYVAIIAGVLFAGLSGSAVADTAALGA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ILIPMMVKAGYNRNRSTGLIAAGGIIAPIIPPSIPMILFGVTSGVSITKLFMAGIVPGIL
HHHHHHHHHCCCCCCCCCEEEECCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
LGIILAVCWWLVTRRDQLEVLPRQSAKEIWQAAREAFWALLLPVIIVGGLRGGVFTPTEA
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AVVAAFYALFVGLCIYRELKVRNLFHVLVAASKTTSVVMFLVAAAMVSAWLITVANIPSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTDVLAPFIEHPLVLLLAINALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FILNCSIGLLTPPVGTVLNVACGVGKIGMEDILKGIWPFLLAETLLLLLLIFFPSLVTVP
HHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEWFTTGH
HHHHCCCC
>Mature Secondary Structure 
ALVVFVGSLLGVMALGLPIAFALLVSGVALMFYLNIFDTQIIAQNLISGADSFPLMAIP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
FFILAGELMNAGGISKRIVRFALALVGHIRGGLGYVAIIAGVLFAGLSGSAVADTAALGA
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ILIPMMVKAGYNRNRSTGLIAAGGIIAPIIPPSIPMILFGVTSGVSITKLFMAGIVPGIL
HHHHHHHHHCCCCCCCCCEEEECCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
LGIILAVCWWLVTRRDQLEVLPRQSAKEIWQAAREAFWALLLPVIIVGGLRGGVFTPTEA
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
AVVAAFYALFVGLCIYRELKVRNLFHVLVAASKTTSVVMFLVAAAMVSAWLITVANIPSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTDVLAPFIEHPLVLLLAINALVLLVGTAMDLTPTVLILTPVLMPIIEKAGIDPVYFGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
FILNCSIGLLTPPVGTVLNVACGVGKIGMEDILKGIWPFLLAETLLLLLLIFFPSLVTVP
HHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEWFTTGH
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]