| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is yfeT [C]
Identifier: 138895153
GI number: 138895153
Start: 1576219
End: 1576770
Strand: Direct
Name: yfeT [C]
Synonym: GTNG_1491
Alternate gene names: 138895153
Gene position: 1576219-1576770 (Clockwise)
Preceding gene: 138895152
Following gene: 138895154
Centisome position: 44.4
GC content: 46.92
Gene sequence:
>552_bases ATGATGCATCCAATTGAAGTCATTTTTTCAGAAATAGAACAAGTATTTGCCGAATTTGACCATATGAGCATTGAGTGTGT AGCGATGCGTCTGGCGAAAGCGAAGCGGATTTTTGTGGCTGGCGAGGGGCGTTCCGGATTCATGGGAAAGGCGTTTGCTA TGCGGCTGATGCATCTCGGCGCAACGGTCTATGCTGTGGGAGAAACGGTCACTCCTTCACTGCAAAGCGGAGATACGTTA ATTGCTATCTCGGGCTCGGGAGTGACAAAACAGACGGTGTGGATTGCAGAAAAGGCGAAACAACTTGGATGTGAGGTGAT TGCCGTCACTACGGATTTATCGTCCGCTTTGGCGAATATCGCTTCTCTTACCGTTCATATTCCGGCGGCCACCAAATACC GGCGTGGTCATGAGACGCAAAGTAAACAACCGCTAGGTTCCTTATTTGACCAATGTACGCACCTGATTTTAGATGCCATC TGCTTGCAATATGCGAACAATCAACAAGTTGAACACCAGAAAGCATTTCAACGGCATAGTAATTTAGAATAA
Upstream 100 bases:
>100_bases CACCCCTCGATTGTGATTATCGGTTCGGCCATCACGCGGGCGGAGCATCCGGAACGGGCGGCGAGAGAATTGAGACAATT GGTTCGAAATAGGGGGATCG
Downstream 100 bases:
>100_bases GTGAAAGGAGCTCCAAGTCAAAAGGTGACTTGGGGCTCTTTTCATTTATGAAAAGTGAAATTGTTGGTTGGTTTGTGTTA GGGTCATTAGTAGCGTGAAA
Product: sugar phosphate aminotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MMHPIEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLGATVYAVGETVTPSLQSGDTL IAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALANIASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAI CLQYANNQQVEHQKAFQRHSNLE
Sequences:
>Translated_183_residues MMHPIEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLGATVYAVGETVTPSLQSGDTL IAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALANIASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAI CLQYANNQQVEHQKAFQRHSNLE >Mature_183_residues MMHPIEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLGATVYAVGETVTPSLQSGDTL IAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALANIASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAI CLQYANNQQVEHQKAFQRHSNLE
Specific function: Unknown
COG id: COG0794
COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 SIS domain [H]
Homologues:
Organism=Escherichia coli, GI1788767, Length=176, Percent_Identity=30.6818181818182, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017552 - InterPro: IPR001347 [H]
Pfam domain/function: PF01380 SIS [H]
EC number: NA
Molecular weight: Translated: 20033; Mature: 20033
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHPIEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLG CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHC ATVYAVGETVTPSLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALANI CCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH ASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEHQKAFQRHS HHHEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC NLE CCC >Mature Secondary Structure MMHPIEVIFSEIEQVFAEFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLMHLG CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHC ATVYAVGETVTPSLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTDLSSALANI CCEEEECCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH ASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEHQKAFQRHS HHHEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC NLE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]