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The map label for this gene is yngJ [H]

Identifier: 138895108

GI number: 138895108

Start: 1530659

End: 1531801

Strand: Direct

Name: yngJ [H]

Synonym: GTNG_1446

Alternate gene names: 138895108

Gene position: 1530659-1531801 (Clockwise)

Preceding gene: 138895107

Following gene: 138895109

Centisome position: 43.11

GC content: 52.93

Gene sequence:

>1143_bases
ATGGATTTTTCGCTGACGAAAGAACAACAAATGATTAAAGAAATGGTTCGCGACTTTGCGGAGAAGGAAATTGCGCCATA
CGCGGCGAAATGGGATGAAGAGGCGTATTTTCCGCGTGAAGTGTTCCGCAAAATGGGCGAGTTGGGGCTGTTGGGCCTTC
CGTTTCCGGAATCGTATGGCGGCGCCGGGGGCGATACGATTTCGTACGCCATTGCCGTCGAAGAAATCGGCCGCGCCTGC
GGTGGCACGGGGCTAAGTTATGCGGCTGCCGTTTCGCTCGGAGCGAGCCCGATTTATTACTTCGGATCAGAAGAGCAAAA
ACAAACGTGGCTTGTGCCAATGGCAAAGGGAGAAACGCTTGGCGCTTTCGGCCTTACGGAGCCGAACGCCGGGTCGGACG
CCGGCGGCACGCGCACAACTGCGGTGCTTGACGGCGATGAGTATGTCATCAATGGCGAAAAATGCTGGATTACAAACGCC
CAATACGCGCGGCAAGTGATCGTCACTGCGGTCACGGGCAAAGATGCGCGCGGCAAAAACATCATCACCGCTCTCATCGT
ACCAACCGACTCCCCAGGATTTACGATCCGTTCAAATTATGACAAAATGGGTGTCCGCGCTTCCAATACGTGCGAACTCG
TTTTTGAGAACGTCCGTGTGCCGAAAGAAAACGTGTTAGGCGACCCGCAAAAAGGGTTTAAGCAGTTTTTGTACACGCTT
GATGGCGGGCGCATATCGATCGCCGCTTTAGCTGTCGGTATTGCACAAGCAGCGTTTGAGAAAGCGCTTCAATATGCGAA
AGAGCGCGTTCAATTTGGGCAATCGATTTCCAAGTTCCAAGCGATCCAATTTAAGCTCGCGGATATGGCGATGGAAATCG
AGCTTGCCCGCAATATGGTGTACAAAGCAGCCTGGCTGAAAGATCAGGGGAAACCGTTCACAAAAGAAGCGTCATTTGCC
AAGCTGTTCGCGTCGGAAATGGGGTTTCGCGTCTGCAACCAGGCGATTCAAATTCATGGTGGCTACGGCTATATGAAAGA
ATACGGCGTCGAACGCCACTTGCGAGATATTAAGCTCATGGAAATCGGCGAAGGCACATCGGAAATCCAACGTCTCGTCA
TCGCCCGCCAGCTCGGATGCTAA

Upstream 100 bases:

>100_bases
CGGTCTTGGTTGCTGGACAAAGCAACTCATTTTCAACGTGATTAAAAACCGACTAGTCGGTTTTTATATAGTTATTCTTC
AAATGGGGGAGAGGGAGAAT

Downstream 100 bases:

>100_bases
AAGCGGAAATATGCGCATATCCATAACAGTGAATTCGGACAAAGGGGAGGAGACGGTCGATGTTAACGGTGACTGTGGGG
AAATTGCTAGAGGAGCGTGC

Product: butyryl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFSLTKEQQMIKEMVRDFAEKEIAPYAAKWDEEAYFPREVFRKMGELGLLGLPFPESYGGAGGDTISYAIAVEEIGRAC
GGTGLSYAAAVSLGASPIYYFGSEEQKQTWLVPMAKGETLGAFGLTEPNAGSDAGGTRTTAVLDGDEYVINGEKCWITNA
QYARQVIVTAVTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENVRVPKENVLGDPQKGFKQFLYTL
DGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSISKFQAIQFKLADMAMEIELARNMVYKAAWLKDQGKPFTKEASFA
KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLMEIGEGTSEIQRLVIARQLGC

Sequences:

>Translated_380_residues
MDFSLTKEQQMIKEMVRDFAEKEIAPYAAKWDEEAYFPREVFRKMGELGLLGLPFPESYGGAGGDTISYAIAVEEIGRAC
GGTGLSYAAAVSLGASPIYYFGSEEQKQTWLVPMAKGETLGAFGLTEPNAGSDAGGTRTTAVLDGDEYVINGEKCWITNA
QYARQVIVTAVTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENVRVPKENVLGDPQKGFKQFLYTL
DGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSISKFQAIQFKLADMAMEIELARNMVYKAAWLKDQGKPFTKEASFA
KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLMEIGEGTSEIQRLVIARQLGC
>Mature_380_residues
MDFSLTKEQQMIKEMVRDFAEKEIAPYAAKWDEEAYFPREVFRKMGELGLLGLPFPESYGGAGGDTISYAIAVEEIGRAC
GGTGLSYAAAVSLGASPIYYFGSEEQKQTWLVPMAKGETLGAFGLTEPNAGSDAGGTRTTAVLDGDEYVINGEKCWITNA
QYARQVIVTAVTGKDARGKNIITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENVRVPKENVLGDPQKGFKQFLYTL
DGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSISKFQAIQFKLADMAMEIELARNMVYKAAWLKDQGKPFTKEASFA
KLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLMEIGEGTSEIQRLVIARQLGC

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=374, Percent_Identity=51.0695187165775, Blast_Score=377, Evalue=1e-104,
Organism=Homo sapiens, GI4557231, Length=377, Percent_Identity=41.6445623342175, Blast_Score=272, Evalue=4e-73,
Organism=Homo sapiens, GI187960098, Length=377, Percent_Identity=41.6445623342175, Blast_Score=271, Evalue=5e-73,
Organism=Homo sapiens, GI4501859, Length=375, Percent_Identity=39.4666666666667, Blast_Score=271, Evalue=5e-73,
Organism=Homo sapiens, GI226958412, Length=378, Percent_Identity=38.8888888888889, Blast_Score=265, Evalue=5e-71,
Organism=Homo sapiens, GI226958414, Length=342, Percent_Identity=40.0584795321637, Blast_Score=248, Evalue=5e-66,
Organism=Homo sapiens, GI7656849, Length=375, Percent_Identity=35.7333333333333, Blast_Score=244, Evalue=9e-65,
Organism=Homo sapiens, GI4557235, Length=387, Percent_Identity=41.343669250646, Blast_Score=241, Evalue=7e-64,
Organism=Homo sapiens, GI76496475, Length=387, Percent_Identity=41.343669250646, Blast_Score=241, Evalue=8e-64,
Organism=Homo sapiens, GI21361497, Length=353, Percent_Identity=40.7932011331445, Blast_Score=240, Evalue=2e-63,
Organism=Homo sapiens, GI4501857, Length=376, Percent_Identity=35.1063829787234, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI4503943, Length=380, Percent_Identity=33.6842105263158, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI7669494, Length=360, Percent_Identity=33.8888888888889, Blast_Score=184, Evalue=9e-47,
Organism=Homo sapiens, GI48976061, Length=396, Percent_Identity=28.030303030303, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI211971008, Length=396, Percent_Identity=28.030303030303, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI38505218, Length=397, Percent_Identity=27.2040302267003, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI218563752, Length=229, Percent_Identity=28.3842794759825, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI87081958, Length=380, Percent_Identity=34.4736842105263, Blast_Score=209, Evalue=2e-55,
Organism=Escherichia coli, GI1786223, Length=377, Percent_Identity=30.5039787798408, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI87081702, Length=336, Percent_Identity=24.4047619047619, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI87082384, Length=315, Percent_Identity=23.4920634920635, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538396, Length=378, Percent_Identity=40.7407407407407, Blast_Score=285, Evalue=4e-77,
Organism=Caenorhabditis elegans, GI17570075, Length=381, Percent_Identity=41.2073490813648, Blast_Score=278, Evalue=3e-75,
Organism=Caenorhabditis elegans, GI17569725, Length=380, Percent_Identity=40.5263157894737, Blast_Score=276, Evalue=1e-74,
Organism=Caenorhabditis elegans, GI17534899, Length=380, Percent_Identity=40.2631578947368, Blast_Score=273, Evalue=1e-73,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=39.247311827957, Blast_Score=263, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI17506239, Length=372, Percent_Identity=37.3655913978495, Blast_Score=247, Evalue=7e-66,
Organism=Caenorhabditis elegans, GI17533517, Length=375, Percent_Identity=36.2666666666667, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71985184, Length=381, Percent_Identity=37.007874015748, Blast_Score=231, Evalue=4e-61,
Organism=Caenorhabditis elegans, GI71990804, Length=279, Percent_Identity=42.6523297491039, Blast_Score=217, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI17534353, Length=376, Percent_Identity=32.4468085106383, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17505929, Length=362, Percent_Identity=31.2154696132597, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17551932, Length=359, Percent_Identity=31.4763231197772, Blast_Score=200, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI71985192, Length=328, Percent_Identity=34.7560975609756, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=37.9310344827586, Blast_Score=160, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=33.0909090909091, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17562446, Length=297, Percent_Identity=31.986531986532, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=34.3096234309623, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI17531913, Length=176, Percent_Identity=35.2272727272727, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=273, Percent_Identity=27.8388278388278, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI86563381, Length=273, Percent_Identity=27.8388278388278, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356377, Length=372, Percent_Identity=48.9247311827957, Blast_Score=365, Evalue=1e-101,
Organism=Drosophila melanogaster, GI24646207, Length=385, Percent_Identity=45.7142857142857, Blast_Score=331, Evalue=5e-91,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=41.5343915343915, Blast_Score=278, Evalue=3e-75,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=40.3693931398417, Blast_Score=268, Evalue=6e-72,
Organism=Drosophila melanogaster, GI24666513, Length=372, Percent_Identity=40.3225806451613, Blast_Score=265, Evalue=4e-71,
Organism=Drosophila melanogaster, GI281363737, Length=380, Percent_Identity=37.6315789473684, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI19920834, Length=380, Percent_Identity=32.6315789473684, Blast_Score=183, Evalue=2e-46,
Organism=Drosophila melanogaster, GI221473076, Length=319, Percent_Identity=24.7648902821317, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI45550141, Length=319, Percent_Identity=24.7648902821317, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41712; Mature: 41712

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSLTKEQQMIKEMVRDFAEKEIAPYAAKWDEEAYFPREVFRKMGELGLLGLPFPESYG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHCCCCEEECCCCCCCC
GAGGDTISYAIAVEEIGRACGGTGLSYAAAVSLGASPIYYFGSEEQKQTWLVPMAKGETL
CCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCEE
GAFGLTEPNAGSDAGGTRTTAVLDGDEYVINGEKCWITNAQYARQVIVTAVTGKDARGKN
CCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCEEEEECHHHHHEEEEEEECCCCCCCCC
IITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENVRVPKENVLGDPQKGFKQFLYTL
EEEEEEEECCCCCEEEECCCHHCCCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHC
DGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSISKFQAIQFKLADMAMEIELARNMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKAAWLKDQGKPFTKEASFAKLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCHHHHHHHCEEE
EIGEGTSEIQRLVIARQLGC
ECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFSLTKEQQMIKEMVRDFAEKEIAPYAAKWDEEAYFPREVFRKMGELGLLGLPFPESYG
CCCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHCCCCEEECCCCCCCC
GAGGDTISYAIAVEEIGRACGGTGLSYAAAVSLGASPIYYFGSEEQKQTWLVPMAKGETL
CCCCCCEEEEEEHHHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCEE
GAFGLTEPNAGSDAGGTRTTAVLDGDEYVINGEKCWITNAQYARQVIVTAVTGKDARGKN
CCCCCCCCCCCCCCCCCEEEEEECCCEEEECCCEEEEECHHHHHEEEEEEECCCCCCCCC
IITALIVPTDSPGFTIRSNYDKMGVRASNTCELVFENVRVPKENVLGDPQKGFKQFLYTL
EEEEEEEECCCCCEEEECCCHHCCCCCCCHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHC
DGGRISIAALAVGIAQAAFEKALQYAKERVQFGQSISKFQAIQFKLADMAMEIELARNMV
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YKAAWLKDQGKPFTKEASFAKLFASEMGFRVCNQAIQIHGGYGYMKEYGVERHLRDIKLM
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHCHHHHHHHCEEE
EIGEGTSEIQRLVIARQLGC
ECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]