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The map label for this gene is kstR2 [H]

Identifier: 138895107

GI number: 138895107

Start: 1529904

End: 1530530

Strand: Direct

Name: kstR2 [H]

Synonym: GTNG_1445

Alternate gene names: 138895107

Gene position: 1529904-1530530 (Clockwise)

Preceding gene: 138895106

Following gene: 138895108

Centisome position: 43.09

GC content: 46.57

Gene sequence:

>627_bases
ATGGCCGATAAACCACTCAGAGATCGCATTATTGACACCGCTCTTCATTTATTTGAGAAATATGGCTACCACGGTGTAAC
GGTCGACCGTATCGTGGCGGAAAGTGACACATCAAAAGGTGGTTTTTACCATAATTTTAAATCGAAAGACGAGTTGCTTT
ACCATATTCATGACGTCTTTATCACGTATGCGCTTACAAAAGCGCGGGAAGCGTATGAAAGCTGTTCGACGCCGACCGAG
CGCTTGTACGCCATCGTTCAATCGTTTGTCAAAGTGTTTCATTTATATAAGCCGCATATTACCGTCTTTTATCAGGAAAG
CACGTACTTAAAACCGGAATATGCCGAGCTGATCAATAAGAAGCGAGAGGAATTTAAACAAATTATTTTTCGTGTCATCC
GTGAGGGGATTGAGGCAGGCGAGTTTCGTCCGGAACTGTCGGTGGAGATCGCTGGCATGTCGATCATCGGCATGGTGAAC
TGGACGTACAAATGGTACAATCCGGACGGACCGCTGTCAATTGAAGAGATTGCGAGCTATTTTGCCGATTTCATTTTGCA
TGCGGTGCTTCGTGACCCGGAGCATCCGGCGGCGGCACAGTTTTTGTTGCGGCCGATCGTCGAATAA

Upstream 100 bases:

>100_bases
TTTTTATTGACAACAGCTACAACTGTCGAATATCTTAATAAACAGGAAGAATATTTTATCTTTTTAGAAATGTTTTACGA
TCGATGTGAAGGAGACTGTT

Downstream 100 bases:

>100_bases
GCCGCTTATTGTTTCCAGACCAACTAGTCGGTCTTGGTTGCTGGACAAAGCAACTCATTTTCAACGTGATTAAAAACCGA
CTAGTCGGTTTTTATATAGT

Product: TetR/AcrR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MADKPLRDRIIDTALHLFEKYGYHGVTVDRIVAESDTSKGGFYHNFKSKDELLYHIHDVFITYALTKAREAYESCSTPTE
RLYAIVQSFVKVFHLYKPHITVFYQESTYLKPEYAELINKKREEFKQIIFRVIREGIEAGEFRPELSVEIAGMSIIGMVN
WTYKWYNPDGPLSIEEIASYFADFILHAVLRDPEHPAAAQFLLRPIVE

Sequences:

>Translated_208_residues
MADKPLRDRIIDTALHLFEKYGYHGVTVDRIVAESDTSKGGFYHNFKSKDELLYHIHDVFITYALTKAREAYESCSTPTE
RLYAIVQSFVKVFHLYKPHITVFYQESTYLKPEYAELINKKREEFKQIIFRVIREGIEAGEFRPELSVEIAGMSIIGMVN
WTYKWYNPDGPLSIEEIASYFADFILHAVLRDPEHPAAAQFLLRPIVE
>Mature_207_residues
ADKPLRDRIIDTALHLFEKYGYHGVTVDRIVAESDTSKGGFYHNFKSKDELLYHIHDVFITYALTKAREAYESCSTPTER
LYAIVQSFVKVFHLYKPHITVFYQESTYLKPEYAELINKKREEFKQIIFRVIREGIEAGEFRPELSVEIAGMSIIGMVNW
TYKWYNPDGPLSIEEIASYFADFILHAVLRDPEHPAAAQFLLRPIVE

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24246; Mature: 24115

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKPLRDRIIDTALHLFEKYGYHGVTVDRIVAESDTSKGGFYHNFKSKDELLYHIHDVF
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
ITYALTKAREAYESCSTPTERLYAIVQSFVKVFHLYKPHITVFYQESTYLKPEYAELINK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
KREEFKQIIFRVIREGIEAGEFRPELSVEIAGMSIIGMVNWTYKWYNPDGPLSIEEIASY
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEEEEEEECCCCCCCHHHHHHH
FADFILHAVLRDPEHPAAAQFLLRPIVE
HHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
ADKPLRDRIIDTALHLFEKYGYHGVTVDRIVAESDTSKGGFYHNFKSKDELLYHIHDVF
CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
ITYALTKAREAYESCSTPTERLYAIVQSFVKVFHLYKPHITVFYQESTYLKPEYAELINK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
KREEFKQIIFRVIREGIEAGEFRPELSVEIAGMSIIGMVNWTYKWYNPDGPLSIEEIASY
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCEEEEEEEEEEEEEECCCCCCCHHHHHHH
FADFILHAVLRDPEHPAAAQFLLRPIVE
HHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA