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The map label for this gene is ymcA [H]

Identifier: 138894824

GI number: 138894824

Start: 1223888

End: 1224319

Strand: Direct

Name: ymcA [H]

Synonym: GTNG_1158

Alternate gene names: 138894824

Gene position: 1223888-1224319 (Clockwise)

Preceding gene: 138894823

Following gene: 138894825

Centisome position: 34.47

GC content: 47.92

Gene sequence:

>432_bases
ATGGCAAAATATACGCGGGATGAGATTTTGACGCAGGCAAAGCAGTTGGCGAAAATGATCGCCGAAACAGAGGAAGTTGA
CTTTTTCAAGCGAGCCGAAGAAAAAATCCATCAAAACGAAAAAGTACGCACGTTAATTAATGAGTTAAAATCGCTGCAAA
AACAAGCAGTCAACTTCCAACATTACGGCAAACATGAAGCGCTAAAGCGGGTCGAGGAGAAAATTGACGCCATTTACGAG
CAGTTGGAGCAAATTCCGATCGTCAGTGAATTCCAGCAGTCGCAGGCCGATGTGAACGATTTGCTTCAGCTTGTCGCTTC
GACGATTTCCAATACAGTGACCGATGAAATTCTTGCGTCGACTGGCGGCGATGTGCTGCGCGGAGAAACGGGTGCGGCGC
TTCGCTACGGCAAGCAGGGTGGTTGCCATTAA

Upstream 100 bases:

>100_bases
AAATCGCTCATTGGTCAATTGGTCAATGTGCGCATTACGCAGGCGAAAACGTGGACATTGACAGGCGAGTTAGCGAATGA
AGCGATCGAGGTGAACTAAG

Downstream 100 bases:

>100_bases
CGCGTTTATGGCGTCTGTTTGTCATGAACGAACAAAAAAGCGTCCTTTCGGGCGCTTTTTTCATTTGTCATAAGCAACGG
GGCTGCATTGAGAGGAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MAKYTRDEILTQAKQLAKMIAETEEVDFFKRAEEKIHQNEKVRTLINELKSLQKQAVNFQHYGKHEALKRVEEKIDAIYE
QLEQIPIVSEFQQSQADVNDLLQLVASTISNTVTDEILASTGGDVLRGETGAALRYGKQGGCH

Sequences:

>Translated_143_residues
MAKYTRDEILTQAKQLAKMIAETEEVDFFKRAEEKIHQNEKVRTLINELKSLQKQAVNFQHYGKHEALKRVEEKIDAIYE
QLEQIPIVSEFQQSQADVNDLLQLVASTISNTVTDEILASTGGDVLRGETGAALRYGKQGGCH
>Mature_142_residues
AKYTRDEILTQAKQLAKMIAETEEVDFFKRAEEKIHQNEKVRTLINELKSLQKQAVNFQHYGKHEALKRVEEKIDAIYEQ
LEQIPIVSEFQQSQADVNDLLQLVASTISNTVTDEILASTGGDVLRGETGAALRYGKQGGCH

Specific function: May work together with ylbF to regulate community development [H]

COG id: COG4550

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016783
- InterPro:   IPR010368 [H]

Pfam domain/function: PF06133 DUF964 [H]

EC number: NA

Molecular weight: Translated: 16161; Mature: 16030

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKYTRDEILTQAKQLAKMIAETEEVDFFKRAEEKIHQNEKVRTLINELKSLQKQAVNFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HYGKHEALKRVEEKIDAIYEQLEQIPIVSEFQQSQADVNDLLQLVASTISNTVTDEILAS
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TGGDVLRGETGAALRYGKQGGCH
CCCCHHCCCCCHHHHCCCCCCCC
>Mature Secondary Structure 
AKYTRDEILTQAKQLAKMIAETEEVDFFKRAEEKIHQNEKVRTLINELKSLQKQAVNFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HYGKHEALKRVEEKIDAIYEQLEQIPIVSEFQQSQADVNDLLQLVASTISNTVTDEILAS
HCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TGGDVLRGETGAALRYGKQGGCH
CCCCHHCCCCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]