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The map label for this gene is ylxY [H]

Identifier: 138894790

GI number: 138894790

Start: 1187243

End: 1188202

Strand: Direct

Name: ylxY [H]

Synonym: GTNG_1124

Alternate gene names: 138894790

Gene position: 1187243-1188202 (Clockwise)

Preceding gene: 138894789

Following gene: 138894791

Centisome position: 33.44

GC content: 49.79

Gene sequence:

>960_bases
ATGGCGTTAGCAGTCATGTTCCTCACCGTCTGGATGGTCGTCCATTGGTCGCCGGTCGGCGACTATATTGAGAGTTGGCG
CCCCGCAGAAACAGCGGCTGTGAAGGAACGTGATAAGTTATACGAAACGATTGCCAAACAAGCAAAGCAATACGAAATTC
CCGCCCAAGATGCGGTTATCGATAAAGTATGGAAGGCGACGCCCGGTTACAATGGTCTTGCCGTCGATATTGACGCTTCT
TATAAAAACATGAAAAAAACAGGGACGTTCGATGAGCGAAAACTCGTGTTCCGCCAAGTGTCTCCGCGCATCCATTTGGA
CGATTTGCCGCCGGCGCCGATTTACCGCGGTCATCCCGACAAGCCGATGGTCTCGTTTTTGATCAATGTAGCCTGGGGAG
AAGAGTATATTCCTGACATGCTTGAGACGTTGAAAAAGCACGATGTCAAGGCGACGTTCTTTTTGGAAGGACGATGGGTA
AAAAATCATCCGGAGATGGCAAAAATGATAGCAGACGCCGGCCATGAAATCGGCAACCATTCTTACAGCCATAAAGATTT
AAAAACGCTTAGCAATGCCGACATCCGCCGCGAACTCGAGAAAACGAATGAAGTGATCGAAGCAGTGACCGCGGTCAAAT
GCAAGTGGTTCGCCCCGCCAGGCGGCAGCTATCGTGATGAGGTTGTCGAAATTGCTGCCAAGCTTCGCATGAAGACGATT
ATGTGGAGTGTCGATACAATAGATTGGCAAAAACCATCGCCATCTGTTATAGTGAAACGGGTAACATCCAAAGTCCATCC
CGGTGCCATGATTTTGATGCATCCAACGATGCCGACGGCGGCCGCGCTTGATGAGCTGATCGTTTCGATTCAGCGCCAAG
GGTACGCCATCGGCAGCTTGACGGCCTTATTCGACGAGAAAAGACTGGCAAAAAAACAGGAGGAACATGGAGTTGATTAA

Upstream 100 bases:

>100_bases
TTAAGGCTCTTTTGTTATGTTCTAACCTGTCCCTCTGCTACATAATTTGTAGTAGTAAAAAAGAGGGGGGACAAGGGTGA
ACAACGGTTATGCTCGTTAT

Downstream 100 bases:

>100_bases
CAAATATACGTGCAAAAACGGTGTACGAATCGTGCTGGAGCAAATTCCGACCGTGCGCTCGGTGGCCATTGGCGTATGGA
TCGGTACAGGCTCGCGCAAC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MALAVMFLTVWMVVHWSPVGDYIESWRPAETAAVKERDKLYETIAKQAKQYEIPAQDAVIDKVWKATPGYNGLAVDIDAS
YKNMKKTGTFDERKLVFRQVSPRIHLDDLPPAPIYRGHPDKPMVSFLINVAWGEEYIPDMLETLKKHDVKATFFLEGRWV
KNHPEMAKMIADAGHEIGNHSYSHKDLKTLSNADIRRELEKTNEVIEAVTAVKCKWFAPPGGSYRDEVVEIAAKLRMKTI
MWSVDTIDWQKPSPSVIVKRVTSKVHPGAMILMHPTMPTAAALDELIVSIQRQGYAIGSLTALFDEKRLAKKQEEHGVD

Sequences:

>Translated_319_residues
MALAVMFLTVWMVVHWSPVGDYIESWRPAETAAVKERDKLYETIAKQAKQYEIPAQDAVIDKVWKATPGYNGLAVDIDAS
YKNMKKTGTFDERKLVFRQVSPRIHLDDLPPAPIYRGHPDKPMVSFLINVAWGEEYIPDMLETLKKHDVKATFFLEGRWV
KNHPEMAKMIADAGHEIGNHSYSHKDLKTLSNADIRRELEKTNEVIEAVTAVKCKWFAPPGGSYRDEVVEIAAKLRMKTI
MWSVDTIDWQKPSPSVIVKRVTSKVHPGAMILMHPTMPTAAALDELIVSIQRQGYAIGSLTALFDEKRLAKKQEEHGVD
>Mature_318_residues
ALAVMFLTVWMVVHWSPVGDYIESWRPAETAAVKERDKLYETIAKQAKQYEIPAQDAVIDKVWKATPGYNGLAVDIDASY
KNMKKTGTFDERKLVFRQVSPRIHLDDLPPAPIYRGHPDKPMVSFLINVAWGEEYIPDMLETLKKHDVKATFFLEGRWVK
NHPEMAKMIADAGHEIGNHSYSHKDLKTLSNADIRRELEKTNEVIEAVTAVKCKWFAPPGGSYRDEVVEIAAKLRMKTIM
WSVDTIDWQKPSPSVIVKRVTSKVHPGAMILMHPTMPTAAALDELIVSIQRQGYAIGSLTALFDEKRLAKKQEEHGVD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=159, Percent_Identity=30.188679245283, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323339, Length=110, Percent_Identity=31.8181818181818, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509
- InterPro:   IPR014228
- InterPro:   IPR010916 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 36164; Mature: 36033

Theoretical pI: Translated: 7.88; Mature: 7.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALAVMFLTVWMVVHWSPVGDYIESWRPAETAAVKERDKLYETIAKQAKQYEIPAQDAVI
CHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DKVWKATPGYNGLAVDIDASYKNMKKTGTFDERKLVFRQVSPRIHLDDLPPAPIYRGHPD
HHHHHCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
KPMVSFLINVAWGEEYIPDMLETLKKHDVKATFFLEGRWVKNHPEMAKMIADAGHEIGNH
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHHHHCCC
SYSHKDLKTLSNADIRRELEKTNEVIEAVTAVKCKWFAPPGGSYRDEVVEIAAKLRMKTI
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHH
MWSVDTIDWQKPSPSVIVKRVTSKVHPGAMILMHPTMPTAAALDELIVSIQRQGYAIGSL
HEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH
TALFDEKRLAKKQEEHGVD
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALAVMFLTVWMVVHWSPVGDYIESWRPAETAAVKERDKLYETIAKQAKQYEIPAQDAVI
HHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
DKVWKATPGYNGLAVDIDASYKNMKKTGTFDERKLVFRQVSPRIHLDDLPPAPIYRGHPD
HHHHHCCCCCCCEEEEECCCHHHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCC
KPMVSFLINVAWGEEYIPDMLETLKKHDVKATFFLEGRWVKNHPEMAKMIADAGHEIGNH
CHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEECCCHHHHHHHHHHHHHHCCC
SYSHKDLKTLSNADIRRELEKTNEVIEAVTAVKCKWFAPPGGSYRDEVVEIAAKLRMKTI
CCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHH
MWSVDTIDWQKPSPSVIVKRVTSKVHPGAMILMHPTMPTAAALDELIVSIQRQGYAIGSL
HEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCHHHH
TALFDEKRLAKKQEEHGVD
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 8825779 [H]