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The map label for this gene is frr [H]

Identifier: 138894772

GI number: 138894772

Start: 1166354

End: 1166911

Strand: Direct

Name: frr [H]

Synonym: GTNG_1106

Alternate gene names: 138894772

Gene position: 1166354-1166911 (Clockwise)

Preceding gene: 138894771

Following gene: 138894773

Centisome position: 32.85

GC content: 50.18

Gene sequence:

>558_bases
ATGGCAAAGCAAGTGATCCAACAGGCGAAAGAAAAAATGGATAAAGCTGTGCAAGCGTTCAGCCGCGAGTTGGCGACCGT
CCGTGCCGGTCGGGCGAACGCGGGGTTGCTTGAGAAAGTAACCGTTGACTATTACGGTGTCGCAACGCCGATCAACCAGC
TCGCTACGATCAGCGTGCCGGAAGCGCGTATGCTTGTCATTCAGCCGTATGACAAATCGGTCATTAAAGAAATGGAAAAA
GCGATTTTAGCGTCGGACTTAGGAGTGACGCCGTCGAATGACGGATCGGTTATCCGCCTTGTCATTCCGCCGCTTACTGA
AGAACGTCGCCGTGAACTGGCGAAGCTCGTCAAAAAATATTCGGAAGAAGCGAAAGTTGCGGTGCGCAACATCCGTCGCG
ATGCAAACGATGAGCTGAAAAAACTCGAGAAAAATAGCGAGATTACGGAAGATGAGCTGCGCAGCTATACCGACGAAGTG
CAAAAGCTGACCGACAGCCATATCGCCAAAATTGACGCCATCACAAAAGAGAAAGAAAAAGAAGTGATGGAAGTATAG

Upstream 100 bases:

>100_bases
ACAATATTCCACTCATCGTCTTTTCGATTACGGAAGAGGGTAACATTAAACGTGCTGTATTAGGAGAAAATATCGGAACG
ATCGTAAGGGGGAAATAACG

Downstream 100 bases:

>100_bases
GAAAACGATGCAAACCCTCTATGTTGATGGAGGGTTTTTTTGCTATAATGGAAAGGCAAAACACGTTTGCGGAGGACACG
TATGTTCAATAAAATGTGGA

Product: ribosome recycling factor

Products: NA

Alternate protein names: RRF; Ribosome-releasing factor [H]

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MAKQVIQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEK
AILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEV
QKLTDSHIAKIDAITKEKEKEVMEV

Sequences:

>Translated_185_residues
MAKQVIQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEK
AILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEV
QKLTDSHIAKIDAITKEKEKEVMEV
>Mature_184_residues
AKQVIQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVPEARMLVIQPYDKSVIKEMEKA
ILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKYSEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQ
KLTDSHIAKIDAITKEKEKEVMEV

Specific function: Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another [H]

COG id: COG0233

COG function: function code J; Ribosome recycling factor

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RRF family [H]

Homologues:

Organism=Homo sapiens, GI20270317, Length=180, Percent_Identity=25, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1786368, Length=185, Percent_Identity=48.6486486486487, Blast_Score=186, Evalue=8e-49,

Paralogues:

None

Copy number: 840 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002661
- InterPro:   IPR015998 [H]

Pfam domain/function: PF01765 RRF [H]

EC number: NA

Molecular weight: Translated: 20824; Mature: 20693

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQVIQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
EARMLVIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKY
CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
SEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKEKEK
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMEV
HHHCC
>Mature Secondary Structure 
AKQVIQQAKEKMDKAVQAFSRELATVRAGRANAGLLEKVTVDYYGVATPINQLATISVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
EARMLVIQPYDKSVIKEMEKAILASDLGVTPSNDGSVIRLVIPPLTEERRRELAKLVKKY
CCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
SEEAKVAVRNIRRDANDELKKLEKNSEITEDELRSYTDEVQKLTDSHIAKIDAITKEKEK
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EVMEV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA