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The map label for this gene is flgD [H]

Identifier: 138894747

GI number: 138894747

Start: 1145120

End: 1145548

Strand: Direct

Name: flgD [H]

Synonym: GTNG_1079

Alternate gene names: 138894747

Gene position: 1145120-1145548 (Clockwise)

Preceding gene: 138894746

Following gene: 138894748

Centisome position: 32.25

GC content: 45.69

Gene sequence:

>429_bases
ATGGCAACGAACGCAATTGACTCAAATTTATGGTTGGCCAACGCTGTTCAGCCGGAACGAAAAACGGGAGATCAAATTTT
AGGGAAAGACGATTTTTTAAAAATTTTGCTCGCCCAGTTGCAAAATCAAGACCCGCTCAACCCGATGGAAGATAGAGAGT
TTATTGCGCAAATGGCGAGTTTTTCGTCGCTCGAGCAAATGATGAATATCGCCAATCTCATGCAGCAATGGATGCAAGCA
AGTGGGCGTGACGCACTTTTGCGCTACAGCGAGTGGATCGGGAAAACGGTGCATTGGCAAGAGGATGATTCAACAATGAG
CGCGGTCGTTCAATCGGTCATGCAAAAAGACGGAAAAATTGTCCTTGAGCTGAATAACGGAACGACGATTGCCGCTGATG
TGGTGACAAAAGTCGAACAAAAAGGATAA

Upstream 100 bases:

>100_bases
GTCAACATGGCGAATCACAGCAAGAACAAAGGCGGGAGCCATCGCCTTCTTCTCCGTTTGCATTAGACGGGATCGAGGCG
GATGTATAGGAGGGGTGGAA

Downstream 100 bases:

>100_bases
AGGGGAGAGAAAATCGATGCTTCGTTCCATGTATTCCGGTATTGGTGCTATGCGCAATTTCCAAACGAAGTTGGATGTGA
TTGGCAACAATATTGCCAAT

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMASFSSLEQMMNIANLMQQWMQA
SGRDALLRYSEWIGKTVHWQEDDSTMSAVVQSVMQKDGKIVLELNNGTTIAADVVTKVEQKG

Sequences:

>Translated_142_residues
MATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMASFSSLEQMMNIANLMQQWMQA
SGRDALLRYSEWIGKTVHWQEDDSTMSAVVQSVMQKDGKIVLELNNGTTIAADVVTKVEQKG
>Mature_141_residues
ATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMASFSSLEQMMNIANLMQQWMQAS
GRDALLRYSEWIGKTVHWQEDDSTMSAVVQSVMQKDGKIVLELNNGTTIAADVVTKVEQKG

Specific function: Required For Flagellar Hook Formation. May Act As A Scaffolding Protein. [C]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 15943; Mature: 15812

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMAS
CCCCCCCCCCEECCCCCCCHHCCCHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FSSLEQMMNIANLMQQWMQASGRDALLRYSEWIGKTVHWQEDDSTMSAVVQSVMQKDGKI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCE
VLELNNGTTIAADVVTKVEQKG
EEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
ATNAIDSNLWLANAVQPERKTGDQILGKDDFLKILLAQLQNQDPLNPMEDREFIAQMAS
CCCCCCCCCEECCCCCCCHHCCCHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
FSSLEQMMNIANLMQQWMQASGRDALLRYSEWIGKTVHWQEDDSTMSAVVQSVMQKDGKI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCE
VLELNNGTTIAADVVTKVEQKG
EEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]