Click here to switch to the map view.

The map label for this gene is fliK [H]

Identifier: 138894746

GI number: 138894746

Start: 1143726

End: 1145108

Strand: Direct

Name: fliK [H]

Synonym: GTNG_1078

Alternate gene names: 138894746

Gene position: 1143726-1145108 (Clockwise)

Preceding gene: 138894745

Following gene: 138894747

Centisome position: 32.21

GC content: 53.8

Gene sequence:

>1383_bases
ATGAAGACGGTGATCGCAGCAAGCTTGTCGCGATCTATGAGCATTGAAGTGACGCCGCCGACGACAAAAAAGGAAACGGG
AATGGCTGACGCATTCGCGGCGCTGCTCGCGAGCAAGCAGGCTGAAGCACAACCGGTTGAAACAGAGGAGGATCGACTGC
CCTCTTTGTCGGAAAACAAAACGGGAAGGATAGATGAGCAGGACGAATCAGCTGAGTTGCCCGTTTTGTCCATGCAAGTG
GGGGGAACTTTTTCTGATCAAAGTGTTGCACAAGGAAGCGACGATCGTTTGCTGGCGGGGATGAGTGAAAAAGGCCGAGG
CAAGCAAAGTGATGGCATGTTCGAAGAGTACGGCAAAGGCAAGCAGAGCGGCGGGGAGAGGGCAATGAACGCAGATTCCC
AGCAGGCAGTCTGGTTCGCTCTGCAAGAGGAAGGGGCATCTCCTGCCCAAAGCATTGCACAAGGAAGCGACGGTCGTTTA
CTGACAGTGGTCAAGGGGGAAAAGGGACATAATGACTCTTTCATCGTTGCGGACGTAAAGGGCAGGGACATAAGAAACAT
GATGTTGCTGCTTGATCATGGAGAAACCCGACCGACCGCCGAGAGAATCGAAAACATACAATCTTCTGCGATCCAACGTT
TGTTCCAAGCGGTTGATGATAGCAACGCACTGGACAGTGTGGGGCGACGAAACGGGTGGGCATATAGGAATCTCGGCGAA
GAGGCTATAAGGCTAAACGGCGCAAACACATCAATCGAACCTTTCTTTCCACCGGTAGCTCAGAAAGCGGAGTACGAAGC
AGCTCGTCTTGCGCCGCTCTCCGCTTCGTTTGCTCGTGAACAACGGTTTGGACCGCATAGAGAGAATCATTTTGTGCCGG
ACGGTCATATGACTTTTTCAGCAAACATGGCCTCACTGTTGTCTGTTGACGCTAGTTCGGACAGTCAGGCAAGCAGAACA
GAAGCCGGTAACGGCAGCTCTCTGATTGATCAAGTCGCCCGTGCCTTGCGGTTGGGCCGATGGATGAAGCTTCCAGGTGG
CGCGGCGCAGCTTGTCATTCGCCTCCATCCGGAACATCTCGGGACGGTTACAGTGAAAATGGTGCACGAAGGTGGTAAGC
TCGCTGCCAAACTGCTTGTGGCGAACGAAGCGGTGAAAGAGCTGCTTCAAGCTCATCTACCGCAGCTCGCCCAGCTGCTC
GATGCGAGTCACATCACCGTCGAAAAATGGACGGTTTGGACCGATTTTGAAGGTTCTTCCATGCCGCCGTATTCCGAGAA
GCGCCAAGGCGGCCGTCAACATGGCGAATCACAGCAAGAACAAAGGCGGGAGCCATCGCCTTCTTCTCCGTTTGCATTAG
ACGGGATCGAGGCGGATGTATAG

Upstream 100 bases:

>100_bases
GCGACAAAGCAGCCGCCATTTTGGAGCAAATGCCGATTGAACAGGCGGCGAACTTGCTTTCGTCGTTGAGTAAATGGGAA
ACGGGAGAGGAGGCGGTCGA

Downstream 100 bases:

>100_bases
GAGGGGTGGAAATGGCAACGAACGCAATTGACTCAAATTTATGGTTGGCCAACGCTGTTCAGCCGGAACGAAAAACGGGA
GATCAAATTTTAGGGAAAGA

Product: FliK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MKTVIAASLSRSMSIEVTPPTTKKETGMADAFAALLASKQAEAQPVETEEDRLPSLSENKTGRIDEQDESAELPVLSMQV
GGTFSDQSVAQGSDDRLLAGMSEKGRGKQSDGMFEEYGKGKQSGGERAMNADSQQAVWFALQEEGASPAQSIAQGSDGRL
LTVVKGEKGHNDSFIVADVKGRDIRNMMLLLDHGETRPTAERIENIQSSAIQRLFQAVDDSNALDSVGRRNGWAYRNLGE
EAIRLNGANTSIEPFFPPVAQKAEYEAARLAPLSASFAREQRFGPHRENHFVPDGHMTFSANMASLLSVDASSDSQASRT
EAGNGSSLIDQVARALRLGRWMKLPGGAAQLVIRLHPEHLGTVTVKMVHEGGKLAAKLLVANEAVKELLQAHLPQLAQLL
DASHITVEKWTVWTDFEGSSMPPYSEKRQGGRQHGESQQEQRREPSPSSPFALDGIEADV

Sequences:

>Translated_460_residues
MKTVIAASLSRSMSIEVTPPTTKKETGMADAFAALLASKQAEAQPVETEEDRLPSLSENKTGRIDEQDESAELPVLSMQV
GGTFSDQSVAQGSDDRLLAGMSEKGRGKQSDGMFEEYGKGKQSGGERAMNADSQQAVWFALQEEGASPAQSIAQGSDGRL
LTVVKGEKGHNDSFIVADVKGRDIRNMMLLLDHGETRPTAERIENIQSSAIQRLFQAVDDSNALDSVGRRNGWAYRNLGE
EAIRLNGANTSIEPFFPPVAQKAEYEAARLAPLSASFAREQRFGPHRENHFVPDGHMTFSANMASLLSVDASSDSQASRT
EAGNGSSLIDQVARALRLGRWMKLPGGAAQLVIRLHPEHLGTVTVKMVHEGGKLAAKLLVANEAVKELLQAHLPQLAQLL
DASHITVEKWTVWTDFEGSSMPPYSEKRQGGRQHGESQQEQRREPSPSSPFALDGIEADV
>Mature_460_residues
MKTVIAASLSRSMSIEVTPPTTKKETGMADAFAALLASKQAEAQPVETEEDRLPSLSENKTGRIDEQDESAELPVLSMQV
GGTFSDQSVAQGSDDRLLAGMSEKGRGKQSDGMFEEYGKGKQSGGERAMNADSQQAVWFALQEEGASPAQSIAQGSDGRL
LTVVKGEKGHNDSFIVADVKGRDIRNMMLLLDHGETRPTAERIENIQSSAIQRLFQAVDDSNALDSVGRRNGWAYRNLGE
EAIRLNGANTSIEPFFPPVAQKAEYEAARLAPLSASFAREQRFGPHRENHFVPDGHMTFSANMASLLSVDASSDSQASRT
EAGNGSSLIDQVARALRLGRWMKLPGGAAQLVIRLHPEHLGTVTVKMVHEGGKLAAKLLVANEAVKELLQAHLPQLAQLL
DASHITVEKWTVWTDFEGSSMPPYSEKRQGGRQHGESQQEQRREPSPSSPFALDGIEADV

Specific function: Controls the length of the flagellar hook [H]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliK family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001635
- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 49841; Mature: 49841

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVIAASLSRSMSIEVTPPTTKKETGMADAFAALLASKQAEAQPVETEEDRLPSLSENK
CCCEEEEHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
TGRIDEQDESAELPVLSMQVGGTFSDQSVAQGSDDRLLAGMSEKGRGKQSDGMFEEYGKG
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCHHHHCCC
KQSGGERAMNADSQQAVWFALQEEGASPAQSIAQGSDGRLLTVVKGEKGHNDSFIVADVK
CCCCCCHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECC
GRDIRNMMLLLDHGETRPTAERIENIQSSAIQRLFQAVDDSNALDSVGRRNGWAYRNLGE
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCC
EAIRLNGANTSIEPFFPPVAQKAEYEAARLAPLSASFAREQRFGPHRENHFVPDGHMTFS
HHEEECCCCCCCCCCCCCHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEC
ANMASLLSVDASSDSQASRTEAGNGSSLIDQVARALRLGRWMKLPGGAAQLVIRLHPEHL
CCHHHHHEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
GTVTVKMVHEGGKLAAKLLVANEAVKELLQAHLPQLAQLLDASHITVEKWTVWTDFEGSS
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
MPPYSEKRQGGRQHGESQQEQRREPSPSSPFALDGIEADV
CCCCHHHHHCCHHCCCCHHHHHCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MKTVIAASLSRSMSIEVTPPTTKKETGMADAFAALLASKQAEAQPVETEEDRLPSLSENK
CCCEEEEHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCC
TGRIDEQDESAELPVLSMQVGGTFSDQSVAQGSDDRLLAGMSEKGRGKQSDGMFEEYGKG
CCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCEEECCCCCCCCCCCCCCHHHHCCC
KQSGGERAMNADSQQAVWFALQEEGASPAQSIAQGSDGRLLTVVKGEKGHNDSFIVADVK
CCCCCCHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECC
GRDIRNMMLLLDHGETRPTAERIENIQSSAIQRLFQAVDDSNALDSVGRRNGWAYRNLGE
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHCCCC
EAIRLNGANTSIEPFFPPVAQKAEYEAARLAPLSASFAREQRFGPHRENHFVPDGHMTFS
HHEEECCCCCCCCCCCCCHHHHCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCEEEC
ANMASLLSVDASSDSQASRTEAGNGSSLIDQVARALRLGRWMKLPGGAAQLVIRLHPEHL
CCHHHHHEECCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCC
GTVTVKMVHEGGKLAAKLLVANEAVKELLQAHLPQLAQLLDASHITVEKWTVWTDFEGSS
CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
MPPYSEKRQGGRQHGESQQEQRREPSPSSPFALDGIEADV
CCCCHHHHHCCHHCCCCHHHHHCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]