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The map label for this gene is yraR [H]

Identifier: 138894537

GI number: 138894537

Start: 942852

End: 943526

Strand: Direct

Name: yraR [H]

Synonym: GTNG_0867

Alternate gene names: 138894537

Gene position: 942852-943526 (Clockwise)

Preceding gene: 138894536

Following gene: 138894541

Centisome position: 26.56

GC content: 53.04

Gene sequence:

>675_bases
TTGGAGGTTTTGGCGTTGGAGCGAAGAACAGCTCTTTTGCTTGGAGCGAGCGGTTTGGTGGGCAGCGAACTGCTGGCGTT
ACTGTTGCAATCGGATTTATACCGGCAAGTGACTATTTTCGTTCGCACCCCGCTGCCGTTGGAACATGAAAAGCTGCAGC
AAGTTGTGGTCGATTTTGCGCGGCTTGAGTCGTATGAACGGTATTTTAATGTTGACGATGTGTTTTGCTGTCTCGGAACG
ACGCGTAAAAAGGCGAAAACAAGGCAGCAATTCATTCAAGTCGACTATGAATATACACTGCGTGCCGCGGCGTTGGCGGA
AAAATGCCGGGCGAAAAGTTTTTTGACCGTCTCTTCGATCGGCGCCAACCCGTGTTCGCCGTTTTTTTATCAGCGCGTCA
AAGGGGAAACGGAAGAGGCGTTGCAGCGGCTGTCCATTCCGTCGCTCCATATTTTCCGCCCGTCGCTGCTTGTCGGCAAG
CGCCGGGAGTTCCGCCTCGGCGAGACGCTCGCCGGATGGCTGTTATGCCGGCTGCCGTTTTTGTTTGTCGGCAAGTGGAA
AAAATATAAGCCGGTCGATGCCAGCCAGCTTGCGTTGGCCATGTTTTACCGGGCGGCATCGGCAGCAAACGGCGTCCATA
TATATGAATGCGATGAATTAGCCCGCATTTCATAA

Upstream 100 bases:

>100_bases
CATGACCTATACCCAGAAAAAATCGATAACCGCTAAAGCCGGCAAAAAATGAGGTGGTTTTTTCGCCAAAACTCATATAT
AATGGACAATGAATTTTTGC

Downstream 100 bases:

>100_bases
TAAAAAGAGGCTCATAGCAGCCTCTTTTTTATTCGATGATCTTGTAGTTTTTATGATTGACGACTGTCCGTTCTTGCAAA
TCAAGCTCACGGTAGTTTTC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MEVLALERRTALLLGASGLVGSELLALLLQSDLYRQVTIFVRTPLPLEHEKLQQVVVDFARLESYERYFNVDDVFCCLGT
TRKKAKTRQQFIQVDYEYTLRAAALAEKCRAKSFLTVSSIGANPCSPFFYQRVKGETEEALQRLSIPSLHIFRPSLLVGK
RREFRLGETLAGWLLCRLPFLFVGKWKKYKPVDASQLALAMFYRAASAANGVHIYECDELARIS

Sequences:

>Translated_224_residues
MEVLALERRTALLLGASGLVGSELLALLLQSDLYRQVTIFVRTPLPLEHEKLQQVVVDFARLESYERYFNVDDVFCCLGT
TRKKAKTRQQFIQVDYEYTLRAAALAEKCRAKSFLTVSSIGANPCSPFFYQRVKGETEEALQRLSIPSLHIFRPSLLVGK
RREFRLGETLAGWLLCRLPFLFVGKWKKYKPVDASQLALAMFYRAASAANGVHIYECDELARIS
>Mature_224_residues
MEVLALERRTALLLGASGLVGSELLALLLQSDLYRQVTIFVRTPLPLEHEKLQQVVVDFARLESYERYFNVDDVFCCLGT
TRKKAKTRQQFIQVDYEYTLRAAALAEKCRAKSFLTVSSIGANPCSPFFYQRVKGETEEALQRLSIPSLHIFRPSLLVGK
RREFRLGETLAGWLLCRLPFLFVGKWKKYKPVDASQLALAMFYRAASAANGVHIYECDELARIS

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To yeast YER004W [H]

Homologues:

Organism=Homo sapiens, GI148728172, Length=182, Percent_Identity=39.010989010989, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI148728168, Length=182, Percent_Identity=39.010989010989, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI148728164, Length=182, Percent_Identity=39.010989010989, Blast_Score=119, Evalue=1e-27,
Organism=Homo sapiens, GI148728166, Length=182, Percent_Identity=39.010989010989, Blast_Score=119, Evalue=2e-27,
Organism=Escherichia coli, GI87082218, Length=220, Percent_Identity=37.2727272727273, Blast_Score=125, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71983631, Length=213, Percent_Identity=36.150234741784, Blast_Score=125, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000534 [H]

Pfam domain/function: PF01118 Semialdhyde_dh [H]

EC number: NA

Molecular weight: Translated: 25490; Mature: 25490

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVLALERRTALLLGASGLVGSELLALLLQSDLYRQVTIFVRTPLPLEHEKLQQVVVDFA
CCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHH
RLESYERYFNVDDVFCCLGTTRKKAKTRQQFIQVDYEYTLRAAALAEKCRAKSFLTVSSI
HHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
GANPCSPFFYQRVKGETEEALQRLSIPSLHIFRPSLLVGKRREFRLGETLAGWLLCRLPF
CCCCCCHHHHHHHCCCHHHHHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHH
LFVGKWKKYKPVDASQLALAMFYRAASAANGVHIYECDELARIS
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHCCC
>Mature Secondary Structure
MEVLALERRTALLLGASGLVGSELLALLLQSDLYRQVTIFVRTPLPLEHEKLQQVVVDFA
CCCCHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHH
RLESYERYFNVDDVFCCLGTTRKKAKTRQQFIQVDYEYTLRAAALAEKCRAKSFLTVSSI
HHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECC
GANPCSPFFYQRVKGETEEALQRLSIPSLHIFRPSLLVGKRREFRLGETLAGWLLCRLPF
CCCCCCHHHHHHHCCCHHHHHHHHCCCCEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHH
LFVGKWKKYKPVDASQLALAMFYRAASAANGVHIYECDELARIS
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]