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The map label for this gene is sspD [H]

Identifier: 138894491

GI number: 138894491

Start: 895067

End: 895318

Strand: Reverse

Name: sspD [H]

Synonym: GTNG_0821

Alternate gene names: 138894491

Gene position: 895318-895067 (Counterclockwise)

Preceding gene: 138894501

Following gene: 138894487

Centisome position: 25.22

GC content: 48.02

Gene sequence:

>252_bases
TTGCTCATACTAATGATGCCACACTTAAACATGACAAAGGAGGCAAGAATGATGGCACGTGGAAGCAACAAACTGCTTGT
TCCAGGCATTGAACAAGCATTGGAACAAATTAAATACGAAATCGCTCAAGAATTTGGCGTACAGCTCGGGGCTGGCACTG
TTTCGCGCGCCAACGGTTCCGTCGGCGGGGAAATTACAAAACGGCTTGTTGCTCAAGCCCAAAGCCAGCTGGCAGGCCGA
AAAACAGAATAA

Upstream 100 bases:

>100_bases
CCTGTTGTTAATTTTATTATAACCACGAACCGAAAACGTTTGCAATAATTTTTTCACAACAAATCCTCCCTTTAATTGCC
ACCTATAGCCCACTAACGGT

Downstream 100 bases:

>100_bases
AGCCGAGCGTCATCACTCGACTTTTTTCATTTTGGAATCTATGCTTTTCGGTTGGCGGTGAACGTTCGCCAGCTTGTGGC
GATCTTTGTTGTCGTTGCGA

Product: small acid-soluble spore protein (major alpha-type SASP)

Products: NA

Alternate protein names: SASP [H]

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MLILMMPHLNMTKEARMMARGSNKLLVPGIEQALEQIKYEIAQEFGVQLGAGTVSRANGSVGGEITKRLVAQAQSQLAGR
KTE

Sequences:

>Translated_83_residues
MLILMMPHLNMTKEARMMARGSNKLLVPGIEQALEQIKYEIAQEFGVQLGAGTVSRANGSVGGEITKRLVAQAQSQLAGR
KTE
>Mature_83_residues
MLILMMPHLNMTKEARMMARGSNKLLVPGIEQALEQIKYEIAQEFGVQLGAGTVSRANGSVGGEITKRLVAQAQSQLAGR
KTE

Specific function: SASP are bound to spore DNA. They are double-stranded DNA-binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to U

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the alpha/beta-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001448
- InterPro:   IPR018126 [H]

Pfam domain/function: PF00269 SASP [H]

EC number: NA

Molecular weight: Translated: 8998; Mature: 8998

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: PS00304 SASP_1 ; PS00684 SASP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILMMPHLNMTKEARMMARGSNKLLVPGIEQALEQIKYEIAQEFGVQLGAGTVSRANGS
CEEEECCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VGGEITKRLVAQAQSQLAGRKTE
CCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLILMMPHLNMTKEARMMARGSNKLLVPGIEQALEQIKYEIAQEFGVQLGAGTVSRANGS
CEEEECCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VGGEITKRLVAQAQSQLAGRKTE
CCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3009398; 9384377; 9852018 [H]