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The map label for this gene is ywcB [H]

Identifier: 138894487

GI number: 138894487

Start: 890669

End: 891010

Strand: Reverse

Name: ywcB [H]

Synonym: GTNG_0817

Alternate gene names: 138894487

Gene position: 891010-890669 (Counterclockwise)

Preceding gene: 138894491

Following gene: 138894486

Centisome position: 25.1

GC content: 45.61

Gene sequence:

>342_bases
ATGGCAGTGAAAAAACAATCCTTTGCCGAACGGCCAGGTGTCGATTATGAAGCGCTCGCCCAATCCGCTATGTTTCGTGG
GCTCATTCAAGAGAAAAAAGCCTTCATTATTCCAGCGACGATCTTTTTCTTCGCCTTTTACTTCACCCTTCCGATATTAA
CGTCATACTCAAACGTGCTTAATGCGCCAGCAATTGGACCGGTTAGTTGGGCTTGGCTGTTTGCTTTCGCACAATTTGTG
ATGACTTGGGCTTTATGCATCCTTTATTCGAAACGGGCCGTCAAGTTTGACGAAATCGTCGAACAAATGAAGCAAGAAGC
GAAGGAAGGAGGAAACGTCTAA

Upstream 100 bases:

>100_bases
TGACAAATTTGTGACAAGAAAGGGGGATCCGCTGCTTCTATCCCGTATTATGTTGTTCCCTTTTTTGAAAACGCTTCAAT
TAAGATAAGGAGGGATTTAT

Downstream 100 bases:

>100_bases
TGAACGGATTAGCCTTTTTCCTCTTCCTTGTCATCGTCGCCTTGACGCTTGTCATTACGTACTATGCTTCGAAACGAACG
AAAACGACAAGCGAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MAVKKQSFAERPGVDYEALAQSAMFRGLIQEKKAFIIPATIFFFAFYFTLPILTSYSNVLNAPAIGPVSWAWLFAFAQFV
MTWALCILYSKRAVKFDEIVEQMKQEAKEGGNV

Sequences:

>Translated_113_residues
MAVKKQSFAERPGVDYEALAQSAMFRGLIQEKKAFIIPATIFFFAFYFTLPILTSYSNVLNAPAIGPVSWAWLFAFAQFV
MTWALCILYSKRAVKFDEIVEQMKQEAKEGGNV
>Mature_112_residues
AVKKQSFAERPGVDYEALAQSAMFRGLIQEKKAFIIPATIFFFAFYFTLPILTSYSNVLNAPAIGPVSWAWLFAFAQFVM
TWALCILYSKRAVKFDEIVEQMKQEAKEGGNV

Specific function: Unknown

COG id: COG3162

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007436 [H]

Pfam domain/function: PF04341 DUF485 [H]

EC number: NA

Molecular weight: Translated: 12801; Mature: 12670

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKKQSFAERPGVDYEALAQSAMFRGLIQEKKAFIIPATIFFFAFYFTLPILTSYSNVL
CCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAPAIGPVSWAWLFAFAQFVMTWALCILYSKRAVKFDEIVEQMKQEAKEGGNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AVKKQSFAERPGVDYEALAQSAMFRGLIQEKKAFIIPATIFFFAFYFTLPILTSYSNVL
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAPAIGPVSWAWLFAFAQFVMTWALCILYSKRAVKFDEIVEQMKQEAKEGGNV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]