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The map label for this gene is ytlR [H]

Identifier: 138894479

GI number: 138894479

Start: 882325

End: 883251

Strand: Direct

Name: ytlR [H]

Synonym: GTNG_0809

Alternate gene names: 138894479

Gene position: 882325-883251 (Clockwise)

Preceding gene: 138894478

Following gene: 138894480

Centisome position: 24.85

GC content: 53.07

Gene sequence:

>927_bases
ATGAATCTGTATTTTATCGTTAACCCTGCAGCCAAAAACGGCCGCTCGGCAATAGTATGGGAACGGGTGCAGCATATGCT
GGAACAGGAAGGCGTGTCATATGAAGTGCACTGGACGAAAAAGGCAGGAGACGGAAAACGAATTGCCCGTCTGATTGCTG
AGCGAAATGCTGAACCGCTAGTGCTCATTGCTGTTGGTGGGGACGGAACTGTGTATGAAGTCGTCAACGGGGCGTCGTTG
TTTCCGCATGTCGTCATCGGCTACATCCCGGCAGGGACAGGAAATGATTTTGCTCGTGGTTTCGGCATGCCGCGCCGTCC
GGAACAGGCGCTTCAACAGCTGTTGACTGGGAAGGTAGCTAGCGGTGATCTTGGCCGCTTTGTGAGCAGTGCTGTACGGG
ATGGGGTGTTTGTCAATAGCATCGGCTGTGGTTTTGATGCTCACATTGCCTGCGCAGTCAACCGATCCAAATGGAAAGGA
CGGCTGAACCGCCTCGGACTCGGTACACTCGTTTATGTGTTTTATTTAGTGAAAGAGCTATTCCGTTATCAACCGACCGA
TCTCGATATTTGTATTGACGGACAAACCTATTCGTTTCAACAAGCTTGGGTGGCGACCGTATCGAATCATCCATACTATG
GTGGCGGGATGCGCATCGCACCGTCAGCCCGGGCCGATGACGGCCTCCTTCACGTGACCGTTGTCAGCCGTCTGACGCGT
TGGAAACTTCTTTCAGTATTTCTAACCGTATTTTGGGGCGGACATGTGCGAATGAAAGAAGTTTCCGTGTTTGCTGGGCG
GAACGTGCGCATTCGCCCTGCTGCTCCTGTGCCGGTTCACGCTGATGGAGAGGAGGCAGGGAGAGGAGAGGTGTCAGCTT
GGATTGAGTCTGGAGGCTTGAGAGTGATCGGTGCGGAAACTTTGTGA

Upstream 100 bases:

>100_bases
AACTTGCATCATCGAATCGTGACGGGAGAGTGTTCAAAGTTATTGATGAACTGAAAAAATAGAGTAGTAGGAATAGTATT
TGGAAAACGGGGGAAGGAAG

Downstream 100 bases:

>100_bases
ATGATTGGTATGTATGTAAAAAGAAGAAAGGAGGTGTGAGGAAGACGAGTGATGGAGAAGCGGATGGTCATGCTTGATGT
CGTATTCTATGTGGTGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNLYFIVNPAAKNGRSAIVWERVQHMLEQEGVSYEVHWTKKAGDGKRIARLIAERNAEPLVLIAVGGDGTVYEVVNGASL
FPHVVIGYIPAGTGNDFARGFGMPRRPEQALQQLLTGKVASGDLGRFVSSAVRDGVFVNSIGCGFDAHIACAVNRSKWKG
RLNRLGLGTLVYVFYLVKELFRYQPTDLDICIDGQTYSFQQAWVATVSNHPYYGGGMRIAPSARADDGLLHVTVVSRLTR
WKLLSVFLTVFWGGHVRMKEVSVFAGRNVRIRPAAPVPVHADGEEAGRGEVSAWIESGGLRVIGAETL

Sequences:

>Translated_308_residues
MNLYFIVNPAAKNGRSAIVWERVQHMLEQEGVSYEVHWTKKAGDGKRIARLIAERNAEPLVLIAVGGDGTVYEVVNGASL
FPHVVIGYIPAGTGNDFARGFGMPRRPEQALQQLLTGKVASGDLGRFVSSAVRDGVFVNSIGCGFDAHIACAVNRSKWKG
RLNRLGLGTLVYVFYLVKELFRYQPTDLDICIDGQTYSFQQAWVATVSNHPYYGGGMRIAPSARADDGLLHVTVVSRLTR
WKLLSVFLTVFWGGHVRMKEVSVFAGRNVRIRPAAPVPVHADGEEAGRGEVSAWIESGGLRVIGAETL
>Mature_308_residues
MNLYFIVNPAAKNGRSAIVWERVQHMLEQEGVSYEVHWTKKAGDGKRIARLIAERNAEPLVLIAVGGDGTVYEVVNGASL
FPHVVIGYIPAGTGNDFARGFGMPRRPEQALQQLLTGKVASGDLGRFVSSAVRDGVFVNSIGCGFDAHIACAVNRSKWKG
RLNRLGLGTLVYVFYLVKELFRYQPTDLDICIDGQTYSFQQAWVATVSNHPYYGGGMRIAPSARADDGLLHVTVVSRLTR
WKLLSVFLTVFWGGHVRMKEVSVFAGRNVRIRPAAPVPVHADGEEAGRGEVSAWIESGGLRVIGAETL

Specific function: May catalyze the ATP-dependent phosphorylation of lipids other than diacylglycerol (DAG). In fact, is not able to exhibit diacylglycerol kinase activity in vitro [H]

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DAGKc domain [H]

Homologues:

Organism=Escherichia coli, GI1788402, Length=234, Percent_Identity=28.6324786324786, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005218
- InterPro:   IPR001206 [H]

Pfam domain/function: PF00781 DAGK_cat [H]

EC number: NA

Molecular weight: Translated: 33668; Mature: 33668

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLYFIVNPAAKNGRSAIVWERVQHMLEQEGVSYEVHWTKKAGDGKRIARLIAERNAEPL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCE
VLIAVGGDGTVYEVVNGASLFPHVVIGYIPAGTGNDFARGFGMPRRPEQALQQLLTGKVA
EEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHCCCCC
SGDLGRFVSSAVRDGVFVNSIGCGFDAHIACAVNRSKWKGRLNRLGLGTLVYVFYLVKEL
CCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHH
FRYQPTDLDICIDGQTYSFQQAWVATVSNHPYYGGGMRIAPSARADDGLLHVTVVSRLTR
HHCCCCCEEEEECCCCCCHHHHEEEEECCCCEECCCEEECCCCCCCCCEEEEHHHHHHHH
WKLLSVFLTVFWGGHVRMKEVSVFAGRNVRIRPAAPVPVHADGEEAGRGEVSAWIESGGL
HHHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCEECCCCCCCCCHHHHHHHCCCE
RVIGAETL
EEEECCCC
>Mature Secondary Structure
MNLYFIVNPAAKNGRSAIVWERVQHMLEQEGVSYEVHWTKKAGDGKRIARLIAERNAEPL
CEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCCCCCE
VLIAVGGDGTVYEVVNGASLFPHVVIGYIPAGTGNDFARGFGMPRRPEQALQQLLTGKVA
EEEEECCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHHCCCCC
SGDLGRFVSSAVRDGVFVNSIGCGFDAHIACAVNRSKWKGRLNRLGLGTLVYVFYLVKEL
CCHHHHHHHHHHHCCEEEEEECCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHH
FRYQPTDLDICIDGQTYSFQQAWVATVSNHPYYGGGMRIAPSARADDGLLHVTVVSRLTR
HHCCCCCEEEEECCCCCCHHHHEEEEECCCCEECCCEEECCCCCCCCCEEEEHHHHHHHH
WKLLSVFLTVFWGGHVRMKEVSVFAGRNVRIRPAAPVPVHADGEEAGRGEVSAWIESGGL
HHHHHHHHHHHHCCCEEEEEEEEECCCCEEEECCCCCCEECCCCCCCCCHHHHHHHCCCE
RVIGAETL
EEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]