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The map label for this gene is yacP [H]

Identifier: 138893767

GI number: 138893767

Start: 106563

End: 107075

Strand: Direct

Name: yacP [H]

Synonym: GTNG_0088

Alternate gene names: 138893767

Gene position: 106563-107075 (Clockwise)

Preceding gene: 138893766

Following gene: 138893768

Centisome position: 3.0

GC content: 44.83

Gene sequence:

>513_bases
ATGAACATTTTGATTGTTGACGGCTATAACATCATTGGGGCATGGCCGGTGCTGCGCCAGTTAAAAGAAGAGGGCGATCT
AGCTGCAGCAAGGGATTTGCTGATTGATAAAATGGCTGATTACAAAGGGTTTACTGGGGATCATGTCATGATCGTGTTTG
ACGCCCATCTCGTGCCAGGGAATGAGAAAAAATATAAAAATTACGATGTTGACGTTATTTTTACAAAGGAAAATGAGACG
GCCGATGAACGGATTGAACGGTTGGCAAAAACGTTAATGAACGCGCGCACAAAGGTATATGTAGCGACATCTGATTATAC
TGAGCAATGGACAGTGTTTAGCCAAGGTGCCCTGCGCAAATCGGCACGCGAACTGCTGTACGAAATCGAGGCGGTTGAGC
GGGATATTTCCAAAAAACTGAAGGAGATCAAGCAGCACACCCCCATCTCGAAAATGCCGCTCAATGATCGAGTTGCCGAA
ATTTTTGAAAAATGGAGAAGAGGGCAAAAATGA

Upstream 100 bases:

>100_bases
GCCGATGCGCGGTCATGTCACCTCGCTCAACGCTTCCGTTGCCGCCAGCCTACTTATGTATGAGGTGTACCGGAAGCGGT
ATCCATTAGGGGAATAGCTG

Downstream 100 bases:

>100_bases
GCGGTTGACGCTGTAAAAATTTGTACTGTATAATAAATATTAGCGATTGATGCGGTCGGGGGGATCAGCGTGGGGGAATG
CTTCAGAGTAGACAATGTCA

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNILIVDGYNIIGAWPVLRQLKEEGDLAAARDLLIDKMADYKGFTGDHVMIVFDAHLVPGNEKKYKNYDVDVIFTKENET
ADERIERLAKTLMNARTKVYVATSDYTEQWTVFSQGALRKSARELLYEIEAVERDISKKLKEIKQHTPISKMPLNDRVAE
IFEKWRRGQK

Sequences:

>Translated_170_residues
MNILIVDGYNIIGAWPVLRQLKEEGDLAAARDLLIDKMADYKGFTGDHVMIVFDAHLVPGNEKKYKNYDVDVIFTKENET
ADERIERLAKTLMNARTKVYVATSDYTEQWTVFSQGALRKSARELLYEIEAVERDISKKLKEIKQHTPISKMPLNDRVAE
IFEKWRRGQK
>Mature_170_residues
MNILIVDGYNIIGAWPVLRQLKEEGDLAAARDLLIDKMADYKGFTGDHVMIVFDAHLVPGNEKKYKNYDVDVIFTKENET
ADERIERLAKTLMNARTKVYVATSDYTEQWTVFSQGALRKSARELLYEIEAVERDISKKLKEIKQHTPISKMPLNDRVAE
IFEKWRRGQK

Specific function: Unknown

COG id: COG3688

COG function: function code R; Predicted RNA-binding protein containing a PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010298 [H]

Pfam domain/function: PF05991 DUF901 [H]

EC number: NA

Molecular weight: Translated: 19722; Mature: 19722

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIVDGYNIIGAWPVLRQLKEEGDLAAARDLLIDKMADYKGFTGDHVMIVFDAHLVPG
CEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
NEKKYKNYDVDVIFTKENETADERIERLAKTLMNARTKVYVATSDYTEQWTVFSQGALRK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH
SARELLYEIEAVERDISKKLKEIKQHTPISKMPLNDRVAEIFEKWRRGQK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNILIVDGYNIIGAWPVLRQLKEEGDLAAARDLLIDKMADYKGFTGDHVMIVFDAHLVPG
CEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCC
NEKKYKNYDVDVIFTKENETADERIERLAKTLMNARTKVYVATSDYTEQWTVFSQGALRK
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHH
SARELLYEIEAVERDISKKLKEIKQHTPISKMPLNDRVAEIFEKWRRGQK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]