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The map label for this gene is yacL [H]

Identifier: 138893759

GI number: 138893759

Start: 98989

End: 100083

Strand: Direct

Name: yacL [H]

Synonym: GTNG_0080

Alternate gene names: 138893759

Gene position: 98989-100083 (Clockwise)

Preceding gene: 138893758

Following gene: 138893760

Centisome position: 2.79

GC content: 45.84

Gene sequence:

>1095_bases
ATGGTCAAACGTATTGTACAACTATTTTTTCTTGCGGTGGGCGGAACGTTGGGAGCCATGTTTTTGCCCGATTTGCTTGA
GCTGTTGAATGTAAGCGGCGTGTCGCTTGTCAATAATTCATACACGCTGGCGGTGTTAGGCGCAGTGGTTTTCTTTTTGC
TGACGTTTTGGCTTGTCGATTATGTCGTCGATATGATCCGTTGGGCTGAGGAAACGTTGGTCAAGGCGCCGGTCGCTGAT
GTGTTATTTGGCAGCCTTGGGCTGATTTTTGGTCTTATTATCGCATTTTTAGTCGTTATGCCGTTGCAGTCGTTTCACAT
TCAAGTGTTGAATACAGTGTTACCGATTTTTTTAACTGTGCTGCTTGGCTATTTAGGATTTCGCGTTGGTTTAAAGAAAC
GGAATGAGCTGATGAACTTATTTTCTCTTTCCAATCGAATGACGAAGAAAAAAGGTGGAGAAGTCGAAAACGAAGCGTCT
AAAGGCGGAGCAGTGAAAATTTTAGACACAAGCGTCATCATTGATGGGCGGATTGCGGACATCTGCCAAACCGGATTTCT
TGAAGGACCGCTTGTCATTCCCCGCTTTGTGCTAGAGGAGCTCCAGCATATCGCTGATTCTTCCGACGTACTGAAGCGAA
ACCGCGGTCGCCGTGGCTTAGATATTTTAAACCGCATCCAAAAAGAGATGGCGATGAAGGTGGAAATTCACGAAGCGGAT
TTCAGTGATGTGCAGGAAGTCGATAGCAAGCTCGTTAAACTGGCGAAACAGCTTCAAGGAGTTGTCGTTACGAACGATTT
TAATTTAAACAAAGTGTGTGAACTGCAAAATGTGCGCGTCCTCAATATTAACGACTTAGCAAACGCTGTTAAACCGGTCG
TGCTGCCGGGTGAAGAGCTGAATGTGCACGTCATCAAAGACGGGAAAGAGCATAACCAGGGTGTCGCCTATTTGGACGAT
GGGACGATGATCGTCGTCGAAGATGGCAAAGAATATATCGGCAAACGGGTTGACGTCTTGGTCACGAGCGTGTTACAAAT
ATTTGCGGGGAGAATGATTTTTGCCAAACTAAAACTGCTGCAAAAGGCGCTGTAA

Upstream 100 bases:

>100_bases
TAGATGTCAAATGTTCAAAAATGGTTAAAAATTGCTTTCCAATTGGTTTCAAACATTGGAAATTGTTTATAATGTTAGAT
AGGGAGGTGAAGATGAGCCG

Downstream 100 bases:

>100_bases
AAAGAACAGGGGAAACGTCTAATGAATTACGAAGCGATCGTATTAGCGGCCGGACAAGGAAAACGGATGAACGCCGGCAT
GAACAAGCAATTTATTGAAC

Product: membrane-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MVKRIVQLFFLAVGGTLGAMFLPDLLELLNVSGVSLVNNSYTLAVLGAVVFFLLTFWLVDYVVDMIRWAEETLVKAPVAD
VLFGSLGLIFGLIIAFLVVMPLQSFHIQVLNTVLPIFLTVLLGYLGFRVGLKKRNELMNLFSLSNRMTKKKGGEVENEAS
KGGAVKILDTSVIIDGRIADICQTGFLEGPLVIPRFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKEMAMKVEIHEAD
FSDVQEVDSKLVKLAKQLQGVVVTNDFNLNKVCELQNVRVLNINDLANAVKPVVLPGEELNVHVIKDGKEHNQGVAYLDD
GTMIVVEDGKEYIGKRVDVLVTSVLQIFAGRMIFAKLKLLQKAL

Sequences:

>Translated_364_residues
MVKRIVQLFFLAVGGTLGAMFLPDLLELLNVSGVSLVNNSYTLAVLGAVVFFLLTFWLVDYVVDMIRWAEETLVKAPVAD
VLFGSLGLIFGLIIAFLVVMPLQSFHIQVLNTVLPIFLTVLLGYLGFRVGLKKRNELMNLFSLSNRMTKKKGGEVENEAS
KGGAVKILDTSVIIDGRIADICQTGFLEGPLVIPRFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKEMAMKVEIHEAD
FSDVQEVDSKLVKLAKQLQGVVVTNDFNLNKVCELQNVRVLNINDLANAVKPVVLPGEELNVHVIKDGKEHNQGVAYLDD
GTMIVVEDGKEYIGKRVDVLVTSVLQIFAGRMIFAKLKLLQKAL
>Mature_364_residues
MVKRIVQLFFLAVGGTLGAMFLPDLLELLNVSGVSLVNNSYTLAVLGAVVFFLLTFWLVDYVVDMIRWAEETLVKAPVAD
VLFGSLGLIFGLIIAFLVVMPLQSFHIQVLNTVLPIFLTVLLGYLGFRVGLKKRNELMNLFSLSNRMTKKKGGEVENEAS
KGGAVKILDTSVIIDGRIADICQTGFLEGPLVIPRFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKEMAMKVEIHEAD
FSDVQEVDSKLVKLAKQLQGVVVTNDFNLNKVCELQNVRVLNINDLANAVKPVVLPGEELNVHVIKDGKEHNQGVAYLDD
GTMIVVEDGKEYIGKRVDVLVTSVLQIFAGRMIFAKLKLLQKAL

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40327; Mature: 40327

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKRIVQLFFLAVGGTLGAMFLPDLLELLNVSGVSLVNNSYTLAVLGAVVFFLLTFWLVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
YVVDMIRWAEETLVKAPVADVLFGSLGLIFGLIIAFLVVMPLQSFHIQVLNTVLPIFLTV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGYLGFRVGLKKRNELMNLFSLSNRMTKKKGGEVENEASKGGAVKILDTSVIIDGRIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCHHHH
ICQTGFLEGPLVIPRFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKEMAMKVEIHEAD
HHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCC
FSDVQEVDSKLVKLAKQLQGVVVTNDFNLNKVCELQNVRVLNINDLANAVKPVVLPGEEL
HHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEEEHHHHHHHHCCEEECCCCC
NVHVIKDGKEHNQGVAYLDDGTMIVVEDGKEYIGKRVDVLVTSVLQIFAGRMIFAKLKLL
EEEEEECCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKAL
HHCC
>Mature Secondary Structure
MVKRIVQLFFLAVGGTLGAMFLPDLLELLNVSGVSLVNNSYTLAVLGAVVFFLLTFWLVD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
YVVDMIRWAEETLVKAPVADVLFGSLGLIFGLIIAFLVVMPLQSFHIQVLNTVLPIFLTV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLGYLGFRVGLKKRNELMNLFSLSNRMTKKKGGEVENEASKGGAVKILDTSVIIDGRIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEECCHHHH
ICQTGFLEGPLVIPRFVLEELQHIADSSDVLKRNRGRRGLDILNRIQKEMAMKVEIHEAD
HHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHEEECCC
FSDVQEVDSKLVKLAKQLQGVVVTNDFNLNKVCELQNVRVLNINDLANAVKPVVLPGEEL
HHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEEEHHHHHHHHCCEEECCCCC
NVHVIKDGKEHNQGVAYLDDGTMIVVEDGKEYIGKRVDVLVTSVLQIFAGRMIFAKLKLL
EEEEEECCCCCCCCEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKAL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]