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The map label for this gene is yacH [H]

Identifier: 138893755

GI number: 138893755

Start: 93259

End: 93807

Strand: Direct

Name: yacH [H]

Synonym: GTNG_0076

Alternate gene names: 138893755

Gene position: 93259-93807 (Clockwise)

Preceding gene: 138893754

Following gene: 138893756

Centisome position: 2.63

GC content: 48.09

Gene sequence:

>549_bases
TTGATTTGCCAAGAATGCAAGCAGCGACCAGCAACGATGCACTTTACGAAAATTGTCAACGGTGAAAAAACGGAATTCCA
TCTTTGTGAACAATGCTCCAAAGAGCATGGCCACATGTTTATGCTCTACGGTAATGATGACTTTTCGCTCAATAACTTGT
TAGCAGGACTGCTCAATTTTCAAGCTCCAATGAAAGAGATGACGGCCAATGCGTTTCCAAATCCCGATTTGCTTCAATGT
GAGACATGCAAAATGACGTATCATCAGTTCACGCAAATCGGACGATTCGGCTGCGCTGACTGTTACCGGACGTTTGCCCG
CTACTTGCCGCCGATTTTGAAACGGCTTCATAGCGGAAATAACGCCCATTCAGGGAAAATTCCGAAGCGGAAAGGCGGCG
TTCTCCATTTACGCAAGCAACTTGCTGTGCTGAAGCAAAAGCTCCAAGAGCTAGTCGCCCGTGAGGAATTTGAACGGGCA
GCCGAAGTGCGCGACCAAATCCGCTCTTTAGAGGATGAACTTCGCCAACGCGGAGAGGGGGATATGTAG

Upstream 100 bases:

>100_bases
CTGTCTTATACATTGGCTTGCCTGAGCGTGATGAATTGCGGGCGCGCATGTTAAAGGCGATGTTGACATCGCTGAAGTAT
AAGTAGGGGAGGGGGAAGCG

Downstream 100 bases:

>100_bases
CGGTATGTCGTTTGAGAAGTTTTTCAATACGGCGGTCAGCGCCTGGATGAGCCAAGAAGGACCCGATTCGGACATTGTTT
TGAGCAGTCGCATCCGGTTA

Product: ClpC ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MICQECKQRPATMHFTKIVNGEKTEFHLCEQCSKEHGHMFMLYGNDDFSLNNLLAGLLNFQAPMKEMTANAFPNPDLLQC
ETCKMTYHQFTQIGRFGCADCYRTFARYLPPILKRLHSGNNAHSGKIPKRKGGVLHLRKQLAVLKQKLQELVAREEFERA
AEVRDQIRSLEDELRQRGEGDM

Sequences:

>Translated_182_residues
MICQECKQRPATMHFTKIVNGEKTEFHLCEQCSKEHGHMFMLYGNDDFSLNNLLAGLLNFQAPMKEMTANAFPNPDLLQC
ETCKMTYHQFTQIGRFGCADCYRTFARYLPPILKRLHSGNNAHSGKIPKRKGGVLHLRKQLAVLKQKLQELVAREEFERA
AEVRDQIRSLEDELRQRGEGDM
>Mature_182_residues
MICQECKQRPATMHFTKIVNGEKTEFHLCEQCSKEHGHMFMLYGNDDFSLNNLLAGLLNFQAPMKEMTANAFPNPDLLQC
ETCKMTYHQFTQIGRFGCADCYRTFARYLPPILKRLHSGNNAHSGKIPKRKGGVLHLRKQLAVLKQKLQELVAREEFERA
AEVRDQIRSLEDELRQRGEGDM

Specific function: Unknown

COG id: COG3880

COG function: function code S; Uncharacterized protein with conserved CXXC pairs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 UVR domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001943 [H]

Pfam domain/function: PF02151 UVR [H]

EC number: NA

Molecular weight: Translated: 21018; Mature: 21018

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS50151 UVR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICQECKQRPATMHFTKIVNGEKTEFHLCEQCSKEHGHMFMLYGNDDFSLNNLLAGLLNF
CCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
QAPMKEMTANAFPNPDLLQCETCKMTYHQFTQIGRFGCADCYRTFARYLPPILKRLHSGN
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
NAHSGKIPKRKGGVLHLRKQLAVLKQKLQELVAREEFERAAEVRDQIRSLEDELRQRGEG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DM
CC
>Mature Secondary Structure
MICQECKQRPATMHFTKIVNGEKTEFHLCEQCSKEHGHMFMLYGNDDFSLNNLLAGLLNF
CCCHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHH
QAPMKEMTANAFPNPDLLQCETCKMTYHQFTQIGRFGCADCYRTFARYLPPILKRLHSGN
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
NAHSGKIPKRKGGVLHLRKQLAVLKQKLQELVAREEFERAAEVRDQIRSLEDELRQRGEG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DM
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]