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The map label for this gene is ctsR [H]

Identifier: 138893754

GI number: 138893754

Start: 92771

End: 93244

Strand: Direct

Name: ctsR [H]

Synonym: GTNG_0075

Alternate gene names: 138893754

Gene position: 92771-93244 (Clockwise)

Preceding gene: 138893753

Following gene: 138893755

Centisome position: 2.61

GC content: 43.25

Gene sequence:

>474_bases
GTGGGAGGTAGAGTGCCAAACATTTCCGACATTATTGAGCAATATTTAAAGCAAGTACTCAATATGAGCGACCAAGATAT
CGTTGAAATTAAACGAAGCGAGATTGCGAATAAATTTCAATGTGTCCCATCGCAAATTAACTATGTCATTAATACGAGGT
TTACGCTTGAGAGAGGGTATATCGTCGAGAGTAAGCGCGGTGGCGGCGGGTATATCCGCATTATGAAAGTGAAGACGAAA
AGTGAGGCTCATCTTATTGACCAACTGCTTGAGCTCGTTGGCCATCGCATTAGCCAATCGAATGCTGAAGATGTAGTAAA
ACGTCTTGTTGAAGAAAAGGTAATTTCGGAGCGGGAAGCGAAAATAATGTTAAGCGTGATGGATCGCTCTGTCTTATACA
TTGGCTTGCCTGAGCGTGATGAATTGCGGGCGCGCATGTTAAAGGCGATGTTGACATCGCTGAAGTATAAGTAG

Upstream 100 bases:

>100_bases
CAAAGTCAACAAGAAGGCGATGATGCCGGTTTCTCCCTATAGGTCTTCTAGTACAAGATGGCAGCTGGTTTCATCGCTAA
GCAGGTTGATTGTGAGGAAG

Downstream 100 bases:

>100_bases
GGGAGGGGGAAGCGTTGATTTGCCAAGAATGCAAGCAGCGACCAGCAACGATGCACTTTACGAAAATTGTCAACGGTGAA
AAAACGGAATTCCATCTTTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Class three stress gene repressor [H]

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MGGRVPNISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFQCVPSQINYVINTRFTLERGYIVESKRGGGGYIRIMKVKTK
SEAHLIDQLLELVGHRISQSNAEDVVKRLVEEKVISEREAKIMLSVMDRSVLYIGLPERDELRARMLKAMLTSLKYK

Sequences:

>Translated_157_residues
MGGRVPNISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFQCVPSQINYVINTRFTLERGYIVESKRGGGGYIRIMKVKTK
SEAHLIDQLLELVGHRISQSNAEDVVKRLVEEKVISEREAKIMLSVMDRSVLYIGLPERDELRARMLKAMLTSLKYK
>Mature_156_residues
GGRVPNISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFQCVPSQINYVINTRFTLERGYIVESKRGGGGYIRIMKVKTKS
EAHLIDQLLELVGHRISQSNAEDVVKRLVEEKVISEREAKIMLSVMDRSVLYIGLPERDELRARMLKAMLTSLKYK

Specific function: Controls the expression of the cellular protein quality control genes clpC, clpE and clpP. Acts as a repressor of these class III stress genes by binding to a directly repeated heptanucleotide operator sequence (A/GGTCAAA NAN A/GGTCAAA). After heat shock,

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008463 [H]

Pfam domain/function: PF05848 CtsR [H]

EC number: NA

Molecular weight: Translated: 18055; Mature: 17924

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGRVPNISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFQCVPSQINYVINTRFTLERGY
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCEECCCEEEEECCE
IVESKRGGGGYIRIMKVKTKSEAHLIDQLLELVGHRISQSNAEDVVKRLVEEKVISEREA
EEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KIMLSVMDRSVLYIGLPERDELRARMLKAMLTSLKYK
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GGRVPNISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFQCVPSQINYVINTRFTLERGY
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCEECCCEEEEECCE
IVESKRGGGGYIRIMKVKTKSEAHLIDQLLELVGHRISQSNAEDVVKRLVEEKVISEREA
EEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KIMLSVMDRSVLYIGLPERDELRARMLKAMLTSLKYK
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]