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The map label for this gene is csfB [H]

Identifier: 138893700

GI number: 138893700

Start: 34706

End: 35059

Strand: Direct

Name: csfB [H]

Synonym: GTNG_0021

Alternate gene names: 138893700

Gene position: 34706-35059 (Clockwise)

Preceding gene: 138893699

Following gene: 138893701

Centisome position: 0.98

GC content: 38.14

Gene sequence:

>354_bases
ATGTTTCATGCACGATTAGCTGCTTTTATTTTTTGCCATTTTTTCAAGTTTCTGCTTGGCAAGTGCTCTGAGACACGTTC
AATCTTTCCATCTACTAGTATAGAATGTTATCAATACGGGAAACATAGAGGATGGGAGGTGGAGAACGTGAGGGTATCGG
TGATCGACAAAAATAAACGCGAAAAAGTGTGCATTGTTTGTGAACAAGAAAAAGCGGAAGGTATTTTTCTTTTTGGCCAT
TTTCTTTGCGTAGATTGCCATCAGGCGATCGTACAAACGAATACAGATGATCCGAATTATGCATTTTATGTGCAGCAGTT
ACGGAAAATGATGACATCCAAAATTTATTCGTAA

Upstream 100 bases:

>100_bases
ATCCCGAACACGGAAGTTAAGCTCTCCAGCGCCGATGGTAGTTGGGGCCAGCGCCCCTGCAAGAGTAGGTCGCTGCTAGG
CTACGAGAAAGCAGCTAATC

Downstream 100 bases:

>100_bases
AGGCCTGGATCAGGCCTGTTTTTATTTGGCCTGCCTTGTGCCGAAACGGTCGTAGGTGCCTTGTACGCGTTTCTTTTCGA
GACGGTTCGTGTTAATATTA

Product: CsfB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MFHARLAAFIFCHFFKFLLGKCSETRSIFPSTSIECYQYGKHRGWEVENVRVSVIDKNKREKVCIVCEQEKAEGIFLFGH
FLCVDCHQAIVQTNTDDPNYAFYVQQLRKMMTSKIYS

Sequences:

>Translated_117_residues
MFHARLAAFIFCHFFKFLLGKCSETRSIFPSTSIECYQYGKHRGWEVENVRVSVIDKNKREKVCIVCEQEKAEGIFLFGH
FLCVDCHQAIVQTNTDDPNYAFYVQQLRKMMTSKIYS
>Mature_117_residues
MFHARLAAFIFCHFFKFLLGKCSETRSIFPSTSIECYQYGKHRGWEVENVRVSVIDKNKREKVCIVCEQEKAEGIFLFGH
FLCVDCHQAIVQTNTDDPNYAFYVQQLRKMMTSKIYS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019700 [H]

Pfam domain/function: PF10764 Gin [H]

EC number: NA

Molecular weight: Translated: 13747; Mature: 13747

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHARLAAFIFCHFFKFLLGKCSETRSIFPSTSIECYQYGKHRGWEVENVRVSVIDKNKR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEECCCC
EKVCIVCEQEKAEGIFLFGHFLCVDCHQAIVQTNTDDPNYAFYVQQLRKMMTSKIYS
CEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFHARLAAFIFCHFFKFLLGKCSETRSIFPSTSIECYQYGKHRGWEVENVRVSVIDKNKR
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCEECCEEEEEEECCCC
EKVCIVCEQEKAEGIFLFGHFLCVDCHQAIVQTNTDDPNYAFYVQQLRKMMTSKIYS
CEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]