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The map label for this gene is 13508085

Identifier: 13508085

GI number: 13508085

Start: 413431

End: 413778

Strand: Direct

Name: 13508085

Synonym: MPN346

Alternate gene names: NA

Gene position: 413431-413778 (Clockwise)

Preceding gene: 13508084

Following gene: 13508086

Centisome position: 50.64

GC content: 29.6

Gene sequence:

>348_bases
ATGTCTGATGCTTTGGATGACGAAAATGTACTTTGTTTTAGGTATAAGAGTTATTACATTAAAGATGATGGAAGCCGAAT
TGATACATTAAATGAAGAGAGAATTAAGCATATTGTTGATTTCACTTTAGATAAATATCTAGATGCAACACAAAATACTC
CGAAATTTGATAATTTTGAAAATCCTGTAAAAGAAGGGTTTAATTCGATTTTTGCCTGTGAGAGTAAAGAAGCAGCAATC
GAATACTATAAAGAATTTAAAAAACAAATTGAACAAAAGAAGCTACCAATTAAAATTGCAAGCATTATAGCGCAAACGAA
GGTAGTGATGAACAAGAAATTAGTGTAA

Upstream 100 bases:

>100_bases
GCCTATTTTTGAAAGTGAATATTCAGACAAGAATCAAACTCTAGAGAACCAGCAAAAGACAACTAGAAGTAAATTTGGTG
AAATTATTCATACCTATACA

Downstream 100 bases:

>100_bases
AAGGTCTTGATAAATCCTCAAAGAGTTTTCTAAGTCAAATCATTTCTGATTACAACGAAACCTTTCAAACAAACTTTAGC
ATTAACAATCTAGATGAATA

Product: type I restriction enzyme HsdR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSDALDDENVLCFRYKSYYIKDDGSRIDTLNEERIKHIVDFTLDKYLDATQNTPKFDNFENPVKEGFNSIFACESKEAAI
EYYKEFKKQIEQKKLPIKIASIIAQTKVVMNKKLV

Sequences:

>Translated_115_residues
MSDALDDENVLCFRYKSYYIKDDGSRIDTLNEERIKHIVDFTLDKYLDATQNTPKFDNFENPVKEGFNSIFACESKEAAI
EYYKEFKKQIEQKKLPIKIASIIAQTKVVMNKKLV
>Mature_114_residues
SDALDDENVLCFRYKSYYIKDDGSRIDTLNEERIKHIVDFTLDKYLDATQNTPKFDNFENPVKEGFNSIFACESKEAAIE
YYKEFKKQIEQKKLPIKIASIIAQTKVVMNKKLV

Specific function: Unknown

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y346_MYCPN (P75432)

Other databases:

- EMBL:   U00089
- PIR:   S73816
- RefSeq:   NP_110034.1
- REBASE:   6705
- GeneID:   877416
- GenomeReviews:   U00089_GR
- KEGG:   mpn:MPN346
- BioCyc:   MPNE272634:MPN346-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13469; Mature: 13337

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDALDDENVLCFRYKSYYIKDDGSRIDTLNEERIKHIVDFTLDKYLDATQNTPKFDNFE
CCCCCCCCCEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NPVKEGFNSIFACESKEAAIEYYKEFKKQIEQKKLPIKIASIIAQTKVVMNKKLV
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDALDDENVLCFRYKSYYIKDDGSRIDTLNEERIKHIVDFTLDKYLDATQNTPKFDNFE
CCCCCCCCEEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
NPVKEGFNSIFACESKEAAIEYYKEFKKQIEQKKLPIKIASIIAQTKVVMNKKLV
CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633