| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488295
Identifier: 13488295
GI number: 13488295
Start: 270449
End: 271126
Strand: Direct
Name: 13488295
Synonym: mlr9302
Alternate gene names: NA
Gene position: 270449-271126 (Clockwise)
Preceding gene: 13488294
Following gene: 13488296
Centisome position: 76.85
GC content: 61.95
Gene sequence:
>678_bases ATGGCAGGGTCTTCAGCGGCTGCAGTGCGCCGGTGTGCTAAAGCCACCGACGTGTGCCAGGCGGGACGATACGACCGCAT TGGGTCAGAGGTTGAGCTGGCCGCGGTCGGCCGCTGTAGACGAATCGGCTTCACCGAGGGGACGCCGGAGCGATGCAGGA AGACCTCGCCGCGTATGCCACGCAGGCCGGTGTGGATCGCCCGATCGATATATGCCGTACGCCATGCCGCCACCCATCTT GTCGAGGCCTGTTACATCGTCATCGCCGGCTTCGTCGGCATGCGCGTGAGCGAAATCCTCTCGATGGAGGTTGGCGCAAT CGAGTTCCGCGCCATCGGCGAAACCGGCGTCAAGCAGGCCTATGTCGTGGCCAGGCTCTTCAAGACCGTCGACCAGCATG GCGGACGGTTGGAACGCTGGATAGCTCCGGAACCTGTCGTGACAGCGGTCAAGCTGCTCGAGCAGTTGAGCGCGCCGTTC CGGGAGGTGTCGGGCAGGCGCGAGCTCTTCCTTGTCAAAAATACGCAGTACGGCGAGATCGTACCGGTCACCCAGATGCA CATCGGCTGGCGGATCAATGACTTTGCCCGTCATGTCGGAGTGCCATTGCATGAAGGAAAACCTTGGCCTTCAGCACTCA CCAGTTCCGCAAACCTTCGCTCGCTTCATCGCGCGTAA
Upstream 100 bases:
>100_bases CGTTACACGGTCTTGGAAATAACCATCTCGGGCTGGACGTCCGCACGGACCGGCTGATCTGACTCGGCCCGCTGGGGTAC TACCCGAACTGACCGGAGCC
Downstream 100 bases:
>100_bases AGACCGATCGCAGCTCCTCGGTCTGGCCGAGCATTACAAGCACGCGTCGGTCGCGATGACCGCGCGCGGATATGTCGGCA GCGACTTCGATCTTCATCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAGSSAAAVRRCAKATDVCQAGRYDRIGSEVELAAVGRCRRIGFTEGTPERCRKTSPRMPRRPVWIARSIYAVRHAATHL VEACYIVIAGFVGMRVSEILSMEVGAIEFRAIGETGVKQAYVVARLFKTVDQHGGRLERWIAPEPVVTAVKLLEQLSAPF REVSGRRELFLVKNTQYGEIVPVTQMHIGWRINDFARHVGVPLHEGKPWPSALTSSANLRSLHRA
Sequences:
>Translated_225_residues MAGSSAAAVRRCAKATDVCQAGRYDRIGSEVELAAVGRCRRIGFTEGTPERCRKTSPRMPRRPVWIARSIYAVRHAATHL VEACYIVIAGFVGMRVSEILSMEVGAIEFRAIGETGVKQAYVVARLFKTVDQHGGRLERWIAPEPVVTAVKLLEQLSAPF REVSGRRELFLVKNTQYGEIVPVTQMHIGWRINDFARHVGVPLHEGKPWPSALTSSANLRSLHRA >Mature_224_residues AGSSAAAVRRCAKATDVCQAGRYDRIGSEVELAAVGRCRRIGFTEGTPERCRKTSPRMPRRPVWIARSIYAVRHAATHLV EACYIVIAGFVGMRVSEILSMEVGAIEFRAIGETGVKQAYVVARLFKTVDQHGGRLERWIAPEPVVTAVKLLEQLSAPFR EVSGRRELFLVKNTQYGEIVPVTQMHIGWRINDFARHVGVPLHEGKPWPSALTSSANLRSLHRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24958; Mature: 24827
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSSAAAVRRCAKATDVCQAGRYDRIGSEVELAAVGRCRRIGFTEGTPERCRKTSPRMP CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC RRPVWIARSIYAVRHAATHLVEACYIVIAGFVGMRVSEILSMEVGAIEFRAIGETGVKQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH YVVARLFKTVDQHGGRLERWIAPEPVVTAVKLLEQLSAPFREVSGRRELFLVKNTQYGEI HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCE VPVTQMHIGWRINDFARHVGVPLHEGKPWPSALTSSANLRSLHRA EEHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHCC >Mature Secondary Structure AGSSAAAVRRCAKATDVCQAGRYDRIGSEVELAAVGRCRRIGFTEGTPERCRKTSPRMP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC RRPVWIARSIYAVRHAATHLVEACYIVIAGFVGMRVSEILSMEVGAIEFRAIGETGVKQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHH YVVARLFKTVDQHGGRLERWIAPEPVVTAVKLLEQLSAPFREVSGRRELFLVKNTQYGEI HHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEECCCCCCE VPVTQMHIGWRINDFARHVGVPLHEGKPWPSALTSSANLRSLHRA EEHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA