| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488294
Identifier: 13488294
GI number: 13488294
Start: 267995
End: 269347
Strand: Direct
Name: 13488294
Synonym: mlr9300
Alternate gene names: NA
Gene position: 267995-269347 (Clockwise)
Preceding gene: 13488293
Following gene: 13488295
Centisome position: 76.15
GC content: 60.16
Gene sequence:
>1353_bases ATGCGCCCGGCAATATATAGTCTGAGACTCCATCAGCCCTCAGCAGAGTCAGCGCCAATGACCATCCAGCCCAGGATTCT CAATGAACCAACCATCAGCTGTCCAAGCTGCAAGGCCGACATCAAGCTCAACGAGTCGCTCGCAGCCCCATTGGTTGCCG CCACGCGCGAAGAATACGAAATCCGCCTGGCGCAGAGCGACGCATCGATGGCTGCCAGAAAAGAGGAGCTTAAGCGCCAG CAGGCCGAGATCGCCGCCGCCAAAGAGGACATCGGCAACCGGGTGGCTGAGCAAATCAAGCTTGAGCGTGCCGCAATCGT GGTCGAGGAAGCCCGCAAGGCAAAATTGCTGCTGTCGGTAGACCTGGAGGACAGGGATAACAAGCTTGCCGAGCTGGAGG CGACGTTGAAGGCGCGCGACGAAAAGCTCGCCGAGGCCCAGCAGCAACAGGCGGAATTCCTGAAACAACAGCGTGCGCTT GACGATGAAAAGCGGGAGATGGCGCTGACCATCGAAAGGAAGATCCAGGAAGGATTGGACGCCGTTCGCGTGAAGGCGAG GTCCGAAGCCGAAGACGGCCTCAAAATGAAGGTTGCGGAAAAAGAAGAACAGATCGCCGGCATGCAGCGCCAGATCGAGG AGCTGAAGCGCCGTGCGGAACAGGGCTCCCAGCAGCTGCAGGGCGAGGTCCTCGAGCTGGAGCTGGAGTCCCTCATTGCC AGCCGGTTCCCGATGGACATCATTGAACCGGTTGCCAAGGGCGAGTTCGGCGGAGATGTCCTGCACCGCGTGGTCGGACC GGGAGGCCAGTCATGCGGCGCCATTTTGTGGGAGTCGAAACGCACCAAGAACTGGAGCCAGGGCTGGCTGGGCAAGCTCC GGTCGGATCAACGCGCGGCGAAAGCTGATATCGCGCTGATGATCTCGGAAGCGTTGCCTTTCGGCGTGGAAACCTTCGAT CTTGTGGACGGAGTCTATGTCGCCCATCCCAAATGTGCGATCCCGATCGCCATCATGCTTCGACAAGCCCTGATCGAGCT GGCCAACTCCCGCCTCGCCCAGAACGGCCAGGCCACCAAAATGGAGCAGGTCTACGGCTACCTGACCGGTCCGCGGTTCC GCCACCGCGTCGAGGCGATCGTGGAGAAATTCTCGGATATGCAGGGGGACCTCGCCAAGGAACGCAAGGCCACAACACGC CTGTGGGCCAAGCGCGAGGCGCAGATCCAAGGGGTGATCGAGTCGACCGTCGGCATGTATGGTGACTTGCAGGGTATCGC CGGAAAAGTAATGCAGGAGATTGAGGGGCTGGATGTGCTGGCGATTGAAGCCTCTTCTCCCGAAACCGAATAG
Upstream 100 bases:
>100_bases CCAAGCCGATGCGGACTGCTTGAGCGCGGTCGACCACGAAATCGCCGTTCCGTGCTTGCGCTGGGGATAACACTCACGTT CACTCTTCGTTCTTTTCCAA
Downstream 100 bases:
>100_bases GTGACCTTCACGCCGGCCAAGGTGATCAAGGACGCCTTCACAACGACTGAGCCGCAACTAGAGGACGCGGCTGAAAGAGG GAGCTCAAGCTCCCCCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MRPAIYSLRLHQPSAESAPMTIQPRILNEPTISCPSCKADIKLNESLAAPLVAATREEYEIRLAQSDASMAARKEELKRQ QAEIAAAKEDIGNRVAEQIKLERAAIVVEEARKAKLLLSVDLEDRDNKLAELEATLKARDEKLAEAQQQQAEFLKQQRAL DDEKREMALTIERKIQEGLDAVRVKARSEAEDGLKMKVAEKEEQIAGMQRQIEELKRRAEQGSQQLQGEVLELELESLIA SRFPMDIIEPVAKGEFGGDVLHRVVGPGGQSCGAILWESKRTKNWSQGWLGKLRSDQRAAKADIALMISEALPFGVETFD LVDGVYVAHPKCAIPIAIMLRQALIELANSRLAQNGQATKMEQVYGYLTGPRFRHRVEAIVEKFSDMQGDLAKERKATTR LWAKREAQIQGVIESTVGMYGDLQGIAGKVMQEIEGLDVLAIEASSPETE
Sequences:
>Translated_450_residues MRPAIYSLRLHQPSAESAPMTIQPRILNEPTISCPSCKADIKLNESLAAPLVAATREEYEIRLAQSDASMAARKEELKRQ QAEIAAAKEDIGNRVAEQIKLERAAIVVEEARKAKLLLSVDLEDRDNKLAELEATLKARDEKLAEAQQQQAEFLKQQRAL DDEKREMALTIERKIQEGLDAVRVKARSEAEDGLKMKVAEKEEQIAGMQRQIEELKRRAEQGSQQLQGEVLELELESLIA SRFPMDIIEPVAKGEFGGDVLHRVVGPGGQSCGAILWESKRTKNWSQGWLGKLRSDQRAAKADIALMISEALPFGVETFD LVDGVYVAHPKCAIPIAIMLRQALIELANSRLAQNGQATKMEQVYGYLTGPRFRHRVEAIVEKFSDMQGDLAKERKATTR LWAKREAQIQGVIESTVGMYGDLQGIAGKVMQEIEGLDVLAIEASSPETE >Mature_450_residues MRPAIYSLRLHQPSAESAPMTIQPRILNEPTISCPSCKADIKLNESLAAPLVAATREEYEIRLAQSDASMAARKEELKRQ QAEIAAAKEDIGNRVAEQIKLERAAIVVEEARKAKLLLSVDLEDRDNKLAELEATLKARDEKLAEAQQQQAEFLKQQRAL DDEKREMALTIERKIQEGLDAVRVKARSEAEDGLKMKVAEKEEQIAGMQRQIEELKRRAEQGSQQLQGEVLELELESLIA SRFPMDIIEPVAKGEFGGDVLHRVVGPGGQSCGAILWESKRTKNWSQGWLGKLRSDQRAAKADIALMISEALPFGVETFD LVDGVYVAHPKCAIPIAIMLRQALIELANSRLAQNGQATKMEQVYGYLTGPRFRHRVEAIVEKFSDMQGDLAKERKATTR LWAKREAQIQGVIESTVGMYGDLQGIAGKVMQEIEGLDVLAIEASSPETE
Specific function: Unknown
COG id: COG4487
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50029; Mature: 50029
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAIYSLRLHQPSAESAPMTIQPRILNEPTISCPSCKADIKLNESLAAPLVAATREEYE CCCCEEEEEECCCCCCCCCEEECCEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCHHHE IRLAQSDASMAARKEELKRQQAEIAAAKEDIGNRVAEQIKLERAAIVVEEARKAKLLLSV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE DLEDRDNKLAELEATLKARDEKLAEAQQQQAEFLKQQRALDDEKREMALTIERKIQEGLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AVRVKARSEAEDGLKMKVAEKEEQIAGMQRQIEELKRRAEQGSQQLQGEVLELELESLIA HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SRFPMDIIEPVAKGEFGGDVLHRVVGPGGQSCGAILWESKRTKNWSQGWLGKLRSDQRAA HHCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCHHHHH KADIALMISEALPFGVETFDLVDGVYVAHPKCAIPIAIMLRQALIELANSRLAQNGQATK HHHHHHHHHHHCCCCCCHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MEQVYGYLTGPRFRHRVEAIVEKFSDMQGDLAKERKATTRLWAKREAQIQGVIESTVGMY HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDLQGIAGKVMQEIEGLDVLAIEASSPETE HHHHHHHHHHHHHHCCCEEEEEECCCCCCC >Mature Secondary Structure MRPAIYSLRLHQPSAESAPMTIQPRILNEPTISCPSCKADIKLNESLAAPLVAATREEYE CCCCEEEEEECCCCCCCCCEEECCEECCCCCCCCCCCCCCCEECCHHHHHHHHHCCHHHE IRLAQSDASMAARKEELKRQQAEIAAAKEDIGNRVAEQIKLERAAIVVEEARKAKLLLSV EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE DLEDRDNKLAELEATLKARDEKLAEAQQQQAEFLKQQRALDDEKREMALTIERKIQEGLD CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AVRVKARSEAEDGLKMKVAEKEEQIAGMQRQIEELKRRAEQGSQQLQGEVLELELESLIA HHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SRFPMDIIEPVAKGEFGGDVLHRVVGPGGQSCGAILWESKRTKNWSQGWLGKLRSDQRAA HHCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCCCCHHHHHHHCCHHHHH KADIALMISEALPFGVETFDLVDGVYVAHPKCAIPIAIMLRQALIELANSRLAQNGQATK HHHHHHHHHHHCCCCCCHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MEQVYGYLTGPRFRHRVEAIVEKFSDMQGDLAKERKATTRLWAKREAQIQGVIESTVGMY HHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GDLQGIAGKVMQEIEGLDVLAIEASSPETE HHHHHHHHHHHHHHCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA