| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488229
Identifier: 13488229
GI number: 13488229
Start: 157093
End: 158190
Strand: Direct
Name: 13488229
Synonym: mlr9174
Alternate gene names: NA
Gene position: 157093-158190 (Clockwise)
Preceding gene: 13488228
Following gene: 13488230
Centisome position: 44.64
GC content: 58.93
Gene sequence:
>1098_bases GTGGATTTGGCAGCCATGCTTAACCTGATGGGGCGGACGTCATATTTGCTTGCGTTCGTCAGTCTAGCCCAGGTTCGTAT GAATTTTACTTTGCCACATACCCTATTTGGGGGATCAAGCGGCATACGCTGCAGAAATATGATTGCCTGCGTCGTATTGC CCCGCGTGAACAAATTGCCGACGACTGGATGGTGCATTCAAGCCGGCCATATGCTTTGGCGGCCTTGCCATGAGGCTTCT GGCCTGCTCATCTCTGGCAAATCGGGTCGGAACCCACCAGCGCCGATCCGACGACAGGCACATATGCCGGGGGGACACAT GTTTGCCTATCCTGTTCGCGCCAGAACCGCCGGGTTCGTAATCGGGGCCTTGAGTGCATTGCTGGCGTTGGGAATTCAAC GGACAAACGGGCAGGCGACTGCCGAACTTTTCGATTATCCTGGGACCGCTCTGAAGGGGACGGCCTCGGCGCAGATAGTC GTTCCATTGCAAGAATGCCATTCAATCTGTACTTCGCGTTCGGGGTGCGTCGGGTTTGACCGTCGGTCTGACACTGGCGT TTGCAGGCTGTTCGCCAGTGTGGACTCCGCCTACGACAGCCCGACGTTCATGGCGGGAACGCGAAGCCTGCTTCCTGCCT ATCGCCCGCCTTCAAATCCGCCCGCACAACCTCCGGCCGTGGTACCTCGAACCGAACCAGCCTTGCCGGAGCCACCGGAT GTCAGCGGCCGCAAGGTCCAATATCGGACCATTCCGGGAGATCCGCGCCCGATCGGATGGGTCTACATCAATGTCTGCAC CGGAGCGCCTGTGGACGCGACTTCCTTGCGCGCCTCGGTCAACGATTTCGTTTTCGAGTCATTGCGGCTCATCCCTGGAA GGATCGAGCACTTTGACAGGAGCACGACGCCGCAATGCGCGAGCGTCCCCAAGGCTATTGGCTATTCGTCAGCGAATGCG CAGGAGTGGAGAATTGGAGCCGCGCTACAGGAGATGGGTCCGATCCTTCGGCCGTTGGGTATCGGAACGCGCGCGGATGG CAAGGCGCGGGATCAGTCGGACCGTTACCGTATCGACATATGGCTCAGCCATCAGTGA
Upstream 100 bases:
>100_bases ATCCAGTCTTCCCCGGCCGCGCCTACTTGCCGTCAACTATGCGCGGCATCCCCGACGGCCATACTTCGACGGAACCAAAC TCTGAGTCAACAAGCGCTTA
Downstream 100 bases:
>100_bases GAGTTCGCCTTAAGCCGCGGCTTTCGAACAATCAGATAGATTGGAAGGGCGACGATCATCACCAGAATGGTGGAAATCCC CCAAAACCTTCCGTTCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MDLAAMLNLMGRTSYLLAFVSLAQVRMNFTLPHTLFGGSSGIRCRNMIACVVLPRVNKLPTTGWCIQAGHMLWRPCHEAS GLLISGKSGRNPPAPIRRQAHMPGGHMFAYPVRARTAGFVIGALSALLALGIQRTNGQATAELFDYPGTALKGTASAQIV VPLQECHSICTSRSGCVGFDRRSDTGVCRLFASVDSAYDSPTFMAGTRSLLPAYRPPSNPPAQPPAVVPRTEPALPEPPD VSGRKVQYRTIPGDPRPIGWVYINVCTGAPVDATSLRASVNDFVFESLRLIPGRIEHFDRSTTPQCASVPKAIGYSSANA QEWRIGAALQEMGPILRPLGIGTRADGKARDQSDRYRIDIWLSHQ
Sequences:
>Translated_365_residues MDLAAMLNLMGRTSYLLAFVSLAQVRMNFTLPHTLFGGSSGIRCRNMIACVVLPRVNKLPTTGWCIQAGHMLWRPCHEAS GLLISGKSGRNPPAPIRRQAHMPGGHMFAYPVRARTAGFVIGALSALLALGIQRTNGQATAELFDYPGTALKGTASAQIV VPLQECHSICTSRSGCVGFDRRSDTGVCRLFASVDSAYDSPTFMAGTRSLLPAYRPPSNPPAQPPAVVPRTEPALPEPPD VSGRKVQYRTIPGDPRPIGWVYINVCTGAPVDATSLRASVNDFVFESLRLIPGRIEHFDRSTTPQCASVPKAIGYSSANA QEWRIGAALQEMGPILRPLGIGTRADGKARDQSDRYRIDIWLSHQ >Mature_365_residues MDLAAMLNLMGRTSYLLAFVSLAQVRMNFTLPHTLFGGSSGIRCRNMIACVVLPRVNKLPTTGWCIQAGHMLWRPCHEAS GLLISGKSGRNPPAPIRRQAHMPGGHMFAYPVRARTAGFVIGALSALLALGIQRTNGQATAELFDYPGTALKGTASAQIV VPLQECHSICTSRSGCVGFDRRSDTGVCRLFASVDSAYDSPTFMAGTRSLLPAYRPPSNPPAQPPAVVPRTEPALPEPPD VSGRKVQYRTIPGDPRPIGWVYINVCTGAPVDATSLRASVNDFVFESLRLIPGRIEHFDRSTTPQCASVPKAIGYSSANA QEWRIGAALQEMGPILRPLGIGTRADGKARDQSDRYRIDIWLSHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39460; Mature: 39460
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLAAMLNLMGRTSYLLAFVSLAQVRMNFTLPHTLFGGSSGIRCRNMIACVVLPRVNKLP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHEEEEEEECCCCCCC TTGWCIQAGHMLWRPCHEASGLLISGKSGRNPPAPIRRQAHMPGGHMFAYPVRARTAGFV CCCCEECCCCHHHHCHHHCCCEEEECCCCCCCCCCHHHCCCCCCCCEEEEEHHHHHHHHH IGALSALLALGIQRTNGQATAELFDYPGTALKGTASAQIVVPLQECHSICTSRSGCVGFD HHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCC RRSDTGVCRLFASVDSAYDSPTFMAGTRSLLPAYRPPSNPPAQPPAVVPRTEPALPEPPD CCCCCHHHHHHHHHHHCCCCCCEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSGRKVQYRTIPGDPRPIGWVYINVCTGAPVDATSLRASVNDFVFESLRLIPGRIEHFDR CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCC STTPQCASVPKAIGYSSANAQEWRIGAALQEMGPILRPLGIGTRADGKARDQSDRYRIDI CCCCHHHHCHHHHCCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCEEEEE WLSHQ EEECC >Mature Secondary Structure MDLAAMLNLMGRTSYLLAFVSLAQVRMNFTLPHTLFGGSSGIRCRNMIACVVLPRVNKLP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCHHHEEEEEEECCCCCCC TTGWCIQAGHMLWRPCHEASGLLISGKSGRNPPAPIRRQAHMPGGHMFAYPVRARTAGFV CCCCEECCCCHHHHCHHHCCCEEEECCCCCCCCCCHHHCCCCCCCCEEEEEHHHHHHHHH IGALSALLALGIQRTNGQATAELFDYPGTALKGTASAQIVVPLQECHSICTSRSGCVGFD HHHHHHHHHHCCCCCCCCEEEHHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCC RRSDTGVCRLFASVDSAYDSPTFMAGTRSLLPAYRPPSNPPAQPPAVVPRTEPALPEPPD CCCCCHHHHHHHHHHHCCCCCCEECCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VSGRKVQYRTIPGDPRPIGWVYINVCTGAPVDATSLRASVNDFVFESLRLIPGRIEHFDR CCCCEEEEEECCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCC STTPQCASVPKAIGYSSANAQEWRIGAALQEMGPILRPLGIGTRADGKARDQSDRYRIDI CCCCHHHHCHHHHCCCCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCCCEEEEE WLSHQ EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA