| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488228
Identifier: 13488228
GI number: 13488228
Start: 141258
End: 141872
Strand: Direct
Name: 13488228
Synonym: mlr9161
Alternate gene names: NA
Gene position: 141258-141872 (Clockwise)
Preceding gene: 13488227
Following gene: 13488229
Centisome position: 40.14
GC content: 59.51
Gene sequence:
>615_bases GTGCGCTCGGCCTATGACGAGCGCGTAAAGGCGCAACAAGAGGGAAGCACCATGAAACCGCAATCTGTCAGTCTCGCTCC GCCGTTGGGGTTTCTCTATCGGATAGGTCAATGCCAAAAGTGCATGCGCCAATCATTCGTTGCAGCCATGGCATTGGTGT CTGGCGCCATAGTAATCACCGCAGGGTTCGAGCGATCGTTTCCAGCGCTTACGCTGGCGGTCGTCAGCCTCGCAAGCGCG GCAACGGCTCTGTGGATTATTCACATCGTCGTCTTCGGGCTGCGGGCGGCGACTTACGCCCGCAGTCCGCGTCAGGATGA AGACGGTTTGGACAAGCCGAGAACATTCAGTCGCCGGGCCCTCATAGGCCTTTTCCTGAAAACCGTTGCGGGGGCGACGC TCGCCACAGCCCTTCCGGGACTGGCAGCAGCCATGGGCGAATGTCCCGGGAAAATGAACTGCGGCTTCTCATCCTGTGCG CAGTCGGGCCAGGTATGGTGCTGTCCGCGAGGGTATCCGATCCTCAATCTCTGCAACTGCAGCTGTTACCAGACCGTCCA GGGGGTGACTCAAGCCGGCTGCAACCAGACAGGAAGCTGTTTCACGGAGTTCTAG
Upstream 100 bases:
>100_bases CCGAAAAAATCTCGGGACGAAGGCATCCCCTATTTGGGATATGCGCATCTTCGACTTCGCTAATATAGTTTGCCCGCCCG TGCGACGCATCAATTAGACT
Downstream 100 bases:
>100_bases CCTATCCTTATGGAATAACTCAGTTCTGGCGTTTCGCGCCGCTGTCGGTGCCCCGGCTGCTGAAATATTCGCCCGGCTGG TCGAAGAGGACGCAACGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MRSAYDERVKAQQEGSTMKPQSVSLAPPLGFLYRIGQCQKCMRQSFVAAMALVSGAIVITAGFERSFPALTLAVVSLASA ATALWIIHIVVFGLRAATYARSPRQDEDGLDKPRTFSRRALIGLFLKTVAGATLATALPGLAAAMGECPGKMNCGFSSCA QSGQVWCCPRGYPILNLCNCSCYQTVQGVTQAGCNQTGSCFTEF
Sequences:
>Translated_204_residues MRSAYDERVKAQQEGSTMKPQSVSLAPPLGFLYRIGQCQKCMRQSFVAAMALVSGAIVITAGFERSFPALTLAVVSLASA ATALWIIHIVVFGLRAATYARSPRQDEDGLDKPRTFSRRALIGLFLKTVAGATLATALPGLAAAMGECPGKMNCGFSSCA QSGQVWCCPRGYPILNLCNCSCYQTVQGVTQAGCNQTGSCFTEF >Mature_204_residues MRSAYDERVKAQQEGSTMKPQSVSLAPPLGFLYRIGQCQKCMRQSFVAAMALVSGAIVITAGFERSFPALTLAVVSLASA ATALWIIHIVVFGLRAATYARSPRQDEDGLDKPRTFSRRALIGLFLKTVAGATLATALPGLAAAMGECPGKMNCGFSSCA QSGQVWCCPRGYPILNLCNCSCYQTVQGVTQAGCNQTGSCFTEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21696; Mature: 21696
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSAYDERVKAQQEGSTMKPQSVSLAPPLGFLYRIGQCQKCMRQSFVAAMALVSGAIVIT CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE AGFERSFPALTLAVVSLASAATALWIIHIVVFGLRAATYARSPRQDEDGLDKPRTFSRRA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LIGLFLKTVAGATLATALPGLAAAMGECPGKMNCGFSSCAQSGQVWCCPRGYPILNLCNC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEECCCCCCHHHHCCC SCYQTVQGVTQAGCNQTGSCFTEF HHHHHHHHHHHHCCCCCCCHHCCC >Mature Secondary Structure MRSAYDERVKAQQEGSTMKPQSVSLAPPLGFLYRIGQCQKCMRQSFVAAMALVSGAIVIT CCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE AGFERSFPALTLAVVSLASAATALWIIHIVVFGLRAATYARSPRQDEDGLDKPRTFSRRA ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LIGLFLKTVAGATLATALPGLAAAMGECPGKMNCGFSSCAQSGQVWCCPRGYPILNLCNC HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEECCCCCCHHHHCCC SCYQTVQGVTQAGCNQTGSCFTEF HHHHHHHHHHHHCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA