| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488169
Identifier: 13488169
GI number: 13488169
Start: 323469
End: 324668
Strand: Reverse
Name: 13488169
Synonym: mll9370
Alternate gene names: NA
Gene position: 324668-323469 (Counterclockwise)
Preceding gene: 13488170
Following gene: 13488341
Centisome position: 92.26
GC content: 56.08
Gene sequence:
>1200_bases ATGTCACGTTACAACCCTCTTCGGCAACGAAGGTGGAGGTCTGCAGTGAATGGCCGGGTAAAGATACTGATTGTTGGGCA TGGCGTACTTGGTGGGGCCGTTCTTGATTTTCTCTGCCAAAGTGGCAGACCCTACGATCTGCACGTTGGAGCACGAGATC TCCAGCGGGCCTCGTTGAGGGTCAACCTCTCAAAGTACACTGCCCTCAACCTCGGGCTCTCTCCTGCCATTGAGATAGTT CCGCTGGATTTGATGAATACAGAGGCGACAGCAGAGCGCCTAGCGGCCCTCCGTCCTGACATAATTTTTAATGCCACGAC TTTGCATTCCTGGTGGCGGATAACGCAATTGCCGACCGATGCCTATCAGCAGATCGATCGAGCACGCGGCGGGGTATGGA CGCCTATGCATCTAATGCTCATACGACGCCTCATGAAGGCTGTGCGGGAAGCTGGTGTGGAGAGCATCGTCGTAAACGCA TCCTACCCTGACGTGACGAATGCCGCGCTTGCGGCCGAGGGTCTCTCGCCGACAATTGGGATCGGTAACATCGCAAACGC CGTGCCGGGCATCCGGTTGGCAGCCGCACATCTTCTGGGTTGCGAATTGAAAGCGGTGGATGTGCAGTTTTTTGCCCAAC ATTATGTCAGTTATCGTATGCCAAGCACCGGTTCCACGGACGGAGCGCCCTATCACTTGAGCATATATCGGAACGGCCAG GAAGTTAAGCCACAGGAACTGGGGCATGATGAGATCTTCGCGAACGTGGCCGGACGTTTCCGCCGGGTCAAAGGTCTTGC GGGCCAATCCGTCACCGCTTCGTCAGCGACAGCCATTCTACGTGCGTTTGCCGATCACTTGGAACGCGTTGTTCACGCGC CGGGACCACTAGGTCTCGTGGGAGGCTATCCCGTTAGGATTGCTCCAACTGGTATTTCGATCGAACTGCCTCAAGGCTTG TCATTGGACGATGCGGTGGAGATCAATTCACAATGCCAGAAGTACGATGGGATCGAGGCGGTCGAAAGCGACGGTACCGT GCGCTTCACGGTTGAATCGGCAGGAATCCTGCGTGAGTTGCTCGGCTATGATTGCGAAGCAATGCCGCTGGATGAGTGCG AAAAACGCGCCGAGGAGTTGGCAGCTAAATACGCCGAATATTGCGGTCGCCTTCAATCAGGCGCGATTCGCGCCGCCTGA
Upstream 100 bases:
>100_bases AAGTCCAGTAAATATAATGTAAAATAATGTAAAATTACATTGCACTATTGTTTCGCACGTTGGACATAAAATTCACGGAA CTCTCCTTTCATCCTTGCAA
Downstream 100 bases:
>100_bases CTTCAAGCGTGCGTGTCCCAATGGCGTTGACCAAGCGCGCGATCCGCACGGGATGGCAGGCTTTTGGGATTACATAATCC CCCACGCCCGAAACCGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MSRYNPLRQRRWRSAVNGRVKILIVGHGVLGGAVLDFLCQSGRPYDLHVGARDLQRASLRVNLSKYTALNLGLSPAIEIV PLDLMNTEATAERLAALRPDIIFNATTLHSWWRITQLPTDAYQQIDRARGGVWTPMHLMLIRRLMKAVREAGVESIVVNA SYPDVTNAALAAEGLSPTIGIGNIANAVPGIRLAAAHLLGCELKAVDVQFFAQHYVSYRMPSTGSTDGAPYHLSIYRNGQ EVKPQELGHDEIFANVAGRFRRVKGLAGQSVTASSATAILRAFADHLERVVHAPGPLGLVGGYPVRIAPTGISIELPQGL SLDDAVEINSQCQKYDGIEAVESDGTVRFTVESAGILRELLGYDCEAMPLDECEKRAEELAAKYAEYCGRLQSGAIRAA
Sequences:
>Translated_399_residues MSRYNPLRQRRWRSAVNGRVKILIVGHGVLGGAVLDFLCQSGRPYDLHVGARDLQRASLRVNLSKYTALNLGLSPAIEIV PLDLMNTEATAERLAALRPDIIFNATTLHSWWRITQLPTDAYQQIDRARGGVWTPMHLMLIRRLMKAVREAGVESIVVNA SYPDVTNAALAAEGLSPTIGIGNIANAVPGIRLAAAHLLGCELKAVDVQFFAQHYVSYRMPSTGSTDGAPYHLSIYRNGQ EVKPQELGHDEIFANVAGRFRRVKGLAGQSVTASSATAILRAFADHLERVVHAPGPLGLVGGYPVRIAPTGISIELPQGL SLDDAVEINSQCQKYDGIEAVESDGTVRFTVESAGILRELLGYDCEAMPLDECEKRAEELAAKYAEYCGRLQSGAIRAA >Mature_398_residues SRYNPLRQRRWRSAVNGRVKILIVGHGVLGGAVLDFLCQSGRPYDLHVGARDLQRASLRVNLSKYTALNLGLSPAIEIVP LDLMNTEATAERLAALRPDIIFNATTLHSWWRITQLPTDAYQQIDRARGGVWTPMHLMLIRRLMKAVREAGVESIVVNAS YPDVTNAALAAEGLSPTIGIGNIANAVPGIRLAAAHLLGCELKAVDVQFFAQHYVSYRMPSTGSTDGAPYHLSIYRNGQE VKPQELGHDEIFANVAGRFRRVKGLAGQSVTASSATAILRAFADHLERVVHAPGPLGLVGGYPVRIAPTGISIELPQGLS LDDAVEINSQCQKYDGIEAVESDGTVRFTVESAGILRELLGYDCEAMPLDECEKRAEELAAKYAEYCGRLQSGAIRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43334; Mature: 43203
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYNPLRQRRWRSAVNGRVKILIVGHGVLGGAVLDFLCQSGRPYDLHVGARDLQRASLR CCCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHEE VNLSKYTALNLGLSPAIEIVPLDLMNTEATAERLAALRPDIIFNATTLHSWWRITQLPTD EEHHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECHHHHHHHHEECCCHH AYQQIDRARGGVWTPMHLMLIRRLMKAVREAGVESIVVNASYPDVTNAALAAEGLSPTIG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCC IGNIANAVPGIRLAAAHLLGCELKAVDVQFFAQHYVSYRMPSTGSTDGAPYHLSIYRNGQ CCCHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC EVKPQELGHDEIFANVAGRFRRVKGLAGQSVTASSATAILRAFADHLERVVHAPGPLGLV CCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECC GGYPVRIAPTGISIELPQGLSLDDAVEINSQCQKYDGIEAVESDGTVRFTVESAGILREL CCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEECHHHHHHHH LGYDCEAMPLDECEKRAEELAAKYAEYCGRLQSGAIRAA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRYNPLRQRRWRSAVNGRVKILIVGHGVLGGAVLDFLCQSGRPYDLHVGARDLQRASLR CCCCHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHEE VNLSKYTALNLGLSPAIEIVPLDLMNTEATAERLAALRPDIIFNATTLHSWWRITQLPTD EEHHHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECHHHHHHHHEECCCHH AYQQIDRARGGVWTPMHLMLIRRLMKAVREAGVESIVVNASYPDVTNAALAAEGLSPTIG HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCC IGNIANAVPGIRLAAAHLLGCELKAVDVQFFAQHYVSYRMPSTGSTDGAPYHLSIYRNGQ CCCHHHHCCCHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC EVKPQELGHDEIFANVAGRFRRVKGLAGQSVTASSATAILRAFADHLERVVHAPGPLGLV CCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECC GGYPVRIAPTGISIELPQGLSLDDAVEINSQCQKYDGIEAVESDGTVRFTVESAGILREL CCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCCCEECCCCEEEEEECHHHHHHHH LGYDCEAMPLDECEKRAEELAAKYAEYCGRLQSGAIRAA HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA