| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488165
Identifier: 13488165
GI number: 13488165
Start: 314665
End: 315060
Strand: Reverse
Name: 13488165
Synonym: mll9357
Alternate gene names: NA
Gene position: 315060-314665 (Counterclockwise)
Preceding gene: 13488336
Following gene: 13488164
Centisome position: 89.53
GC content: 59.34
Gene sequence:
>396_bases ATGTTTGTCGACGCATCGGCCATCATCGCCATCATAGGCGACGAAGAGGATGGCTTGGCGCTTGCTGCGCGCCTTGGTCA GGCCGGGAGTGTCCGCGTCTCGCCGATCGTTGTGTATGAGGCCGTCGCCGGCCTGGCGCGCAAACGTGCCTGCCCGATCG AAGAGGCAGAAGAGCTTGTTACCCTTATGTTGGACGAGATTCCCGCGCAAATCATCGAGATCAATGGCGCGATCGGGCAG GAAGCCATCCGGGCGTTCCATCGGTTCGGTAAGGGCCGGCACAAGGCGGATTTGAATATGGGCGATTGTTTCGCCTACGC CTGTGCCAGGCTGTACGGCATTCCGCTGCTATTCAAGGGCAATGATTTCGTGCACACCGACATCGAGGTGGCATGA
Upstream 100 bases:
>100_bases CCAGCGGCTGAAGGCGCTTGCCGAGCGTTATCGCGCCTTTCCCGAAACCAGCGCCCAAGCCGACAAGGCCTTTTTCGATG ACCTGTCCGGAGAATAGCTG
Downstream 100 bases:
>100_bases TGGACCGGAAAGCAGAGGGCGAACATACCGCCGGAGAAGACAAGGCCAGCGACGACCTGCCAGATATCGTCGACGTGGTG ATGGAAATGGGCCAAGCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MFVDASAIIAIIGDEEDGLALAARLGQAGSVRVSPIVVYEAVAGLARKRACPIEEAEELVTLMLDEIPAQIIEINGAIGQ EAIRAFHRFGKGRHKADLNMGDCFAYACARLYGIPLLFKGNDFVHTDIEVA
Sequences:
>Translated_131_residues MFVDASAIIAIIGDEEDGLALAARLGQAGSVRVSPIVVYEAVAGLARKRACPIEEAEELVTLMLDEIPAQIIEINGAIGQ EAIRAFHRFGKGRHKADLNMGDCFAYACARLYGIPLLFKGNDFVHTDIEVA >Mature_131_residues MFVDASAIIAIIGDEEDGLALAARLGQAGSVRVSPIVVYEAVAGLARKRACPIEEAEELVTLMLDEIPAQIIEINGAIGQ EAIRAFHRFGKGRHKADLNMGDCFAYACARLYGIPLLFKGNDFVHTDIEVA
Specific function: Unknown
COG id: COG3742
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0110 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002716 [H]
Pfam domain/function: PF01850 PIN [H]
EC number: NA
Molecular weight: Translated: 14085; Mature: 14085
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVDASAIIAIIGDEEDGLALAARLGQAGSVRVSPIVVYEAVAGLARKRACPIEEAEELV CEECCCEEEEEECCCCCCHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHH TLMLDEIPAQIIEINGAIGQEAIRAFHRFGKGRHKADLNMGDCFAYACARLYGIPLLFKG HHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC NDFVHTDIEVA CCEEECCEEEC >Mature Secondary Structure MFVDASAIIAIIGDEEDGLALAARLGQAGSVRVSPIVVYEAVAGLARKRACPIEEAEELV CEECCCEEEEEECCCCCCHHHHHHCCCCCCEEECHHHHHHHHHHHHHHCCCCHHHHHHHH TLMLDEIPAQIIEINGAIGQEAIRAFHRFGKGRHKADLNMGDCFAYACARLYGIPLLFKG HHHHHHHHHHEEEECCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC NDFVHTDIEVA CCEEECCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]