BacMap

Definition	Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession	NC_002679
Length	351,911

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The map label for this gene is phnL [H]

Identifier: 13488094

GI number: 13488094

Start: 130452

End: 131183

Strand: Reverse

Name: phnL [H]

Synonym: mll9150

Alternate gene names: 13488094

Gene position: 131183-130452 (Counterclockwise)

Preceding gene: 13488095

Following gene: 13488093

Centisome position: 37.28

GC content: 63.39

Gene sequence:

>732_bases
ATGACCATTCGATTGCACGCCAAGGGTCTTGCCAAGACCTTCACGCTCCACACCCAGGGCGGCACCATCCTGCCCGTCTT
CGACAATATTGAGCTTGCCGTAAAGGCCGGCGAATGCGTCTGCCTGCACGGACCATCCGGTGCTGGCAAGTCGACGCTGC
TGCGCTCGCTCTATGCCAACTACAAGCCGGACGCCGGTAAGATCCTCGTCCAGCACATTGGCGACACCGTCGATCTCCTG
GCTGCCGAACCCTGGGAAGTGGTTGAAATCCGCCGCCGCACCATCGGCTATGTCAGCCAGTTCCTGCGTGTGATTCCAAG
GGTGCCGACGCTGGATATCGTCGCCGAGCCGGCGATCGTGAACGGCGTTCCCCCGGAGAAAGCGCATGCCGCTGCCCGCG
CCCTGCTGTCGCGGCTGCGCATCCCCGAGCGTCTTTGGTCTCTAGCCCCTGCCACCTTCTCCGGTGGCGAGCAGCAGCGC
GTCAACATCGCCCGCAGCTTCATCGCCGACTATCCAGTGCTGCTGCTCGACGAGCCGACGGCCTCGCTCGACGCAACCAA
CCGGCAGACAGTCATCGAACTGATCAACGAAGCCAAGGCACGCGGTGCTGCCATCGTCGGAATCTTCCACGACGAGGAGG
TGCGCGAGGCTGTCGCGGACAGGTTATTCGAAGTTACACCTCGCTCGCCGGAATGGACGGCGCGTTCGATACCGGAGCCA
ACCCGCGCGTGA

Upstream 100 bases:

>100_bases
AACAGGGTTTGACCGACCAGGTGCTGGACGACCCCCATCATCCCTACACACAGCTGCTCGTCTCCTCTGTCCTGCAAGTT
TAAGACAAAAAGGACATCCC

Downstream 100 bases:

>100_bases
AAGCGCGATCGGGCACCGCAGAAGCTCGTTCGTCAGTGATTCCGTTTTGTCGAGCGTCTCTGTCCCCGTTTGTCATTCGA
CTGTCATTCTATCATGCGAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MTIRLHAKGLAKTFTLHTQGGTILPVFDNIELAVKAGECVCLHGPSGAGKSTLLRSLYANYKPDAGKILVQHIGDTVDLL
AAEPWEVVEIRRRTIGYVSQFLRVIPRVPTLDIVAEPAIVNGVPPEKAHAAARALLSRLRIPERLWSLAPATFSGGEQQR
VNIARSFIADYPVLLLDEPTASLDATNRQTVIELINEAKARGAAIVGIFHDEEVREAVADRLFEVTPRSPEWTARSIPEP
TRA

Sequences:

>Translated_243_residues
MTIRLHAKGLAKTFTLHTQGGTILPVFDNIELAVKAGECVCLHGPSGAGKSTLLRSLYANYKPDAGKILVQHIGDTVDLL
AAEPWEVVEIRRRTIGYVSQFLRVIPRVPTLDIVAEPAIVNGVPPEKAHAAARALLSRLRIPERLWSLAPATFSGGEQQR
VNIARSFIADYPVLLLDEPTASLDATNRQTVIELINEAKARGAAIVGIFHDEEVREAVADRLFEVTPRSPEWTARSIPEP
TRA
>Mature_242_residues
TIRLHAKGLAKTFTLHTQGGTILPVFDNIELAVKAGECVCLHGPSGAGKSTLLRSLYANYKPDAGKILVQHIGDTVDLLA
AEPWEVVEIRRRTIGYVSQFLRVIPRVPTLDIVAEPAIVNGVPPEKAHAAARALLSRLRIPERLWSLAPATFSGGEQQRV
NIARSFIADYPVLLLDEPTASLDATNRQTVIELINEAKARGAAIVGIFHDEEVREAVADRLFEVTPRSPEWTARSIPEPT
RA

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]

COG id: COG4778

COG function: function code P; ABC-type phosphonate transport system, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=195, Percent_Identity=28.2051282051282, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI42741659, Length=200, Percent_Identity=27, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI27881501, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI30795238, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI42490749, Length=175, Percent_Identity=33.1428571428571, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI21536378, Length=188, Percent_Identity=30.3191489361702, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI9961250, Length=193, Percent_Identity=30.0518134715026, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI105990541, Length=202, Percent_Identity=28.7128712871287, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI31657092, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI255708477, Length=187, Percent_Identity=31.0160427807487, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI9961252, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4505771, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27477115, Length=198, Percent_Identity=28.2828282828283, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1790534, Length=218, Percent_Identity=64.2201834862385, Blast_Score=285, Evalue=3e-78,
Organism=Escherichia coli, GI1788225, Length=219, Percent_Identity=36.986301369863, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1786703, Length=194, Percent_Identity=34.5360824742268, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787029, Length=198, Percent_Identity=33.8383838383838, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=33.5, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI87081834, Length=221, Percent_Identity=29.4117647058824, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789672, Length=198, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1787089, Length=198, Percent_Identity=34.8484848484849, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1786398, Length=203, Percent_Identity=31.5270935960591, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787712, Length=196, Percent_Identity=32.6530612244898, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1789962, Length=205, Percent_Identity=29.7560975609756, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786698, Length=214, Percent_Identity=30.3738317757009, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789032, Length=241, Percent_Identity=30.2904564315353, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1789873, Length=185, Percent_Identity=32.4324324324324, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87081709, Length=196, Percent_Identity=32.1428571428571, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI145693107, Length=191, Percent_Identity=34.0314136125654, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI87081791, Length=196, Percent_Identity=30.6122448979592, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1788472, Length=216, Percent_Identity=30.0925925925926, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788761, Length=201, Percent_Identity=32.3383084577114, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1786253, Length=208, Percent_Identity=29.3269230769231, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI48995001, Length=230, Percent_Identity=27.3913043478261, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788644, Length=194, Percent_Identity=30.9278350515464, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1789593, Length=225, Percent_Identity=30.6666666666667, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787500, Length=207, Percent_Identity=27.536231884058, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1790467, Length=200, Percent_Identity=30, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790544, Length=217, Percent_Identity=31.3364055299539, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=28.643216080402, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786872, Length=210, Percent_Identity=29.0476190476191, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787370, Length=219, Percent_Identity=30.5936073059361, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789864, Length=257, Percent_Identity=29.5719844357977, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789891, Length=203, Percent_Identity=31.5270935960591, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1786319, Length=213, Percent_Identity=28.6384976525822, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788450, Length=191, Percent_Identity=31.413612565445, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789991, Length=230, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87082268, Length=197, Percent_Identity=29.9492385786802, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786563, Length=200, Percent_Identity=32, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787759, Length=219, Percent_Identity=30.5936073059361, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994883, Length=229, Percent_Identity=27.9475982532751, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=33.6683417085427, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1790190, Length=215, Percent_Identity=28.8372093023256, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786345, Length=218, Percent_Identity=28.8990825688073, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787112, Length=179, Percent_Identity=32.4022346368715, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788897, Length=207, Percent_Identity=26.0869565217391, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788506, Length=224, Percent_Identity=29.0178571428571, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081782, Length=205, Percent_Identity=26.8292682926829, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1790525, Length=214, Percent_Identity=28.9719626168224, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786803, Length=201, Percent_Identity=27.363184079602, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI87082267, Length=203, Percent_Identity=29.064039408867, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI115533592, Length=200, Percent_Identity=33, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17558664, Length=197, Percent_Identity=30.9644670050761, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI115533608, Length=197, Percent_Identity=26.9035532994924, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=194, Percent_Identity=27.8350515463918, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193211017, Length=194, Percent_Identity=27.8350515463918, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17569143, Length=187, Percent_Identity=27.807486631016, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323217, Length=208, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6322640, Length=197, Percent_Identity=34.010152284264, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357907, Length=201, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24666092, Length=218, Percent_Identity=26.605504587156, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85726357, Length=197, Percent_Identity=29.4416243654822, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI17136662, Length=186, Percent_Identity=29.5698924731183, Blast_Score=65, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR012701 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 26561; Mature: 26430

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRLHAKGLAKTFTLHTQGGTILPVFDNIELAVKAGECVCLHGPSGAGKSTLLRSLYAN
CEEEEECCCCEEEEEEEECCCEEEEEECCEEEEEECCCEEEEECCCCCCHHHHHHHHHHC
YKPDAGKILVQHIGDTVDLLAAEPWEVVEIRRRTIGYVSQFLRVIPRVPTLDIVAEPAIV
CCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCHHC
NGVPPEKAHAAARALLSRLRIPERLWSLAPATFSGGEQQRVNIARSFIADYPVLLLDEPT
CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCC
ASLDATNRQTVIELINEAKARGAAIVGIFHDEEVREAVADRLFEVTPRSPEWTARSIPEP
CCCCCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TRA
CCC
>Mature Secondary Structure 
TIRLHAKGLAKTFTLHTQGGTILPVFDNIELAVKAGECVCLHGPSGAGKSTLLRSLYAN
EEEEECCCCEEEEEEEECCCEEEEEECCEEEEEECCCEEEEECCCCCCHHHHHHHHHHC
YKPDAGKILVQHIGDTVDLLAAEPWEVVEIRRRTIGYVSQFLRVIPRVPTLDIVAEPAIV
CCCCHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCHHC
NGVPPEKAHAAARALLSRLRIPERLWSLAPATFSGGEQQRVNIARSFIADYPVLLLDEPT
CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCC
ASLDATNRQTVIELINEAKARGAAIVGIFHDEEVREAVADRLFEVTPRSPEWTARSIPEP
CCCCCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
TRA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]