| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is icc [C]
Identifier: 13488092
GI number: 13488092
Start: 127744
End: 128721
Strand: Reverse
Name: icc [C]
Synonym: mll9148
Alternate gene names: 13488092
Gene position: 128721-127744 (Counterclockwise)
Preceding gene: 13488093
Following gene: 13488091
Centisome position: 36.58
GC content: 57.57
Gene sequence:
>978_bases GTGCTTACCGGGCATCATGCGCCCGTCAGGGCGTATGATGCCCATGCATCATCCAATTCATCCACCGGGTTCCGAGGTCG ATTGAGGCTGTCGGTGGCGACTACTGAAAGGCAATGCTCCATGATCATAGCGCATCTCAGTGATCTTCATATCCGCGAGA CGGGCAAACCCTTCGCTTCCGGAAACGTGGATTGCACTGCACGGGCGGCGCAAGCGTTCGAGCGCGTCGCCAACATGACT CCAAGGCCGGACATGATGGTGGTCACCGGGGATCTGGCTGATAGCGGCCAAATCGGTGAATATCAGCTGCTTAAGGAGTT GACCGAAGGGTTGCCGTTCCCGGTCCATCTGGCGCTTGGCAACCACGACATCCGGGAGAATTTCCTGGCTGTTTTTCCCG AAAAGAAGGGCCCTGGCGGCTTCGTGCAGTTTTGCGTCGAACACGACAAGCTGCGTGTCATCGGGCTGGACACCCTTGTT GAAGGCGAGGGCCTGGGTCGCCTTTGCTCCGAACGACTTTCGTACCTTCGGGATTGCCTACAGGAGCGGCCCAATACTTC TACCCTCATTCTTCTCCATCATCCGCCTTTCGCCTTTGGTGGGGGTATTTACGACGCCGTGAGGCTGATCGACGGAGCGA GGGAGCTAGGCGAGATTATCACAGCCAACAAACAGGTCGTTCGCCTCCTCTGCGGCCATCATCACCGCGCGATCGACTGC CTATGGAATGGCACGCTCGCCTCGGTAGCGCCGTCGGTTGTAAGCTCCTGCCATCTTCAGTTGGGCGATGTTCGCGTCTT TAAGAACATCAATGAGCCCCCGGCATTCAAGCTTCATGTGCTGGTACCTGAAAGCGGGTTCGTATCGCACAACGTCTTCG TCGAAGATTTCGGTCCGGCTTACGAAAACATCCCCGATCCCAACTACCAGGCGCTGGCTTCCATGAGGAAGCAAACCGCG CTGGCAGCGTCTCGGTAG
Upstream 100 bases:
>100_bases AATACGCCCATGCTTTACGGCAAGCGGGGAGACATTGCCTGGCTGCCGCATCGCACCCCGATGATGGACTTCGGTCCATT CAACATGCCCGCATAGTCTT
Downstream 100 bases:
>100_bases TACGGTCATGCACGATACCAGAGTCGCACCGCTCCTGCAGATCAGGGACCTTCGCGTTCGGCTCGAGTCGACACGCGGAT CCACCGAGATTTTGCGGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MLTGHHAPVRAYDAHASSNSSTGFRGRLRLSVATTERQCSMIIAHLSDLHIRETGKPFASGNVDCTARAAQAFERVANMT PRPDMMVVTGDLADSGQIGEYQLLKELTEGLPFPVHLALGNHDIRENFLAVFPEKKGPGGFVQFCVEHDKLRVIGLDTLV EGEGLGRLCSERLSYLRDCLQERPNTSTLILLHHPPFAFGGGIYDAVRLIDGARELGEIITANKQVVRLLCGHHHRAIDC LWNGTLASVAPSVVSSCHLQLGDVRVFKNINEPPAFKLHVLVPESGFVSHNVFVEDFGPAYENIPDPNYQALASMRKQTA LAASR
Sequences:
>Translated_325_residues MLTGHHAPVRAYDAHASSNSSTGFRGRLRLSVATTERQCSMIIAHLSDLHIRETGKPFASGNVDCTARAAQAFERVANMT PRPDMMVVTGDLADSGQIGEYQLLKELTEGLPFPVHLALGNHDIRENFLAVFPEKKGPGGFVQFCVEHDKLRVIGLDTLV EGEGLGRLCSERLSYLRDCLQERPNTSTLILLHHPPFAFGGGIYDAVRLIDGARELGEIITANKQVVRLLCGHHHRAIDC LWNGTLASVAPSVVSSCHLQLGDVRVFKNINEPPAFKLHVLVPESGFVSHNVFVEDFGPAYENIPDPNYQALASMRKQTA LAASR >Mature_325_residues MLTGHHAPVRAYDAHASSNSSTGFRGRLRLSVATTERQCSMIIAHLSDLHIRETGKPFASGNVDCTARAAQAFERVANMT PRPDMMVVTGDLADSGQIGEYQLLKELTEGLPFPVHLALGNHDIRENFLAVFPEKKGPGGFVQFCVEHDKLRVIGLDTLV EGEGLGRLCSERLSYLRDCLQERPNTSTLILLHHPPFAFGGGIYDAVRLIDGARELGEIITANKQVVRLLCGHHHRAIDC LWNGTLASVAPSVVSSCHLQLGDVRVFKNINEPPAFKLHVLVPESGFVSHNVFVEDFGPAYENIPDPNYQALASMRKQTA LAASR
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 35591; Mature: 35591
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTGHHAPVRAYDAHASSNSSTGFRGRLRLSVATTERQCSMIIAHLSDLHIRETGKPFAS CCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCEECCCCCCCCC GNVDCTARAAQAFERVANMTPRPDMMVVTGDLADSGQIGEYQLLKELTEGLPFPVHLALG CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC NHDIRENFLAVFPEKKGPGGFVQFCVEHDKLRVIGLDTLVEGEGLGRLCSERLSYLRDCL CCHHHCCCEEEECCCCCCCHHHHHEEECCCEEEEEEHHEECCCCHHHHHHHHHHHHHHHH QERPNTSTLILLHHPPFAFGGGIYDAVRLIDGARELGEIITANKQVVRLLCGHHHRAIDC HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEE LWNGTLASVAPSVVSSCHLQLGDVRVFKNINEPPAFKLHVLVPESGFVSHNVFVEDFGPA EECCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCH YENIPDPNYQALASMRKQTALAASR HHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLTGHHAPVRAYDAHASSNSSTGFRGRLRLSVATTERQCSMIIAHLSDLHIRETGKPFAS CCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCEECCCCCCCCC GNVDCTARAAQAFERVANMTPRPDMMVVTGDLADSGQIGEYQLLKELTEGLPFPVHLALG CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEEC NHDIRENFLAVFPEKKGPGGFVQFCVEHDKLRVIGLDTLVEGEGLGRLCSERLSYLRDCL CCHHHCCCEEEECCCCCCCHHHHHEEECCCEEEEEEHHEECCCCHHHHHHHHHHHHHHHH QERPNTSTLILLHHPPFAFGGGIYDAVRLIDGARELGEIITANKQVVRLLCGHHHRAIDC HHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEE LWNGTLASVAPSVVSSCHLQLGDVRVFKNINEPPAFKLHVLVPESGFVSHNVFVEDFGPA EECCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCH YENIPDPNYQALASMRKQTALAASR HHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA