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The map label for this gene is panD1 [H]

Identifier: 13488064

GI number: 13488064

Start: 74688

End: 75140

Strand: Reverse

Name: panD1 [H]

Synonym: mll9093

Alternate gene names: 13488064

Gene position: 75140-74688 (Counterclockwise)

Preceding gene: 13488065

Following gene: 13488329

Centisome position: 21.35

GC content: 56.95

Gene sequence:

>453_bases
ATGCGCAAAATAGTCGCCGGCAAGCTGCACGGCATCCACGTCACCGAAGCAAACCTCGATTACCATGGTTCGATAACGCT
CGACCCAGACCACTGCGAAGAAGCAGGGATCCTGCCCATGGAATTCGTGGAGATTTGGAACAAGAATTCCGGTGCGCGGA
TTTCGACCTATGTCATCCTCGGCGAGCGCGGCTCACGATGCTGTATTCTAAACGGAGCAGCTGCCCGCACCTGCCAGCCC
GGCGACCAGATCATTGTCTGCAACTCCATCTATCTGGACGAAGCGCACATTACCTCGCTGAAGCCGCGGATCGTCACGTT
CGACCAGGATAACAACATACTCGACCGCCTGAGCTACTCGGTCGATCTCGACCCAGATGGCCGATACTGTTTCTCCATCC
TTGATGAGGCGGATGAGGCTTTGGCCATTCCCGCCCTGGTCTCTGGCGCGTGA

Upstream 100 bases:

>100_bases
GGGTGCCGGTCTCAGCGGCGGCGCTCTCGTCGTCGGAATCTAGCGGGGGCGACCCGCTGCCAAGATTAACCTTGCATGAT
GAATAGGGACAACAAAACCA

Downstream 100 bases:

>100_bases
CTTGCGCTCCGCATATGTGTGACGGCCTCTCCCCCGTTGCAACTTGTTCGGCGCTGAAGAGGGGATCTAAAACCTGCCGT
AGCCGCTGACACTCCGGCTT

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase 1 [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MRKIVAGKLHGIHVTEANLDYHGSITLDPDHCEEAGILPMEFVEIWNKNSGARISTYVILGERGSRCCILNGAAARTCQP
GDQIIVCNSIYLDEAHITSLKPRIVTFDQDNNILDRLSYSVDLDPDGRYCFSILDEADEALAIPALVSGA

Sequences:

>Translated_150_residues
MRKIVAGKLHGIHVTEANLDYHGSITLDPDHCEEAGILPMEFVEIWNKNSGARISTYVILGERGSRCCILNGAAARTCQP
GDQIIVCNSIYLDEAHITSLKPRIVTFDQDNNILDRLSYSVDLDPDGRYCFSILDEADEALAIPALVSGA
>Mature_150_residues
MRKIVAGKLHGIHVTEANLDYHGSITLDPDHCEEAGILPMEFVEIWNKNSGARISTYVILGERGSRCCILNGAAARTCQP
GDQIIVCNSIYLDEAHITSLKPRIVTFDQDNNILDRLSYSVDLDPDGRYCFSILDEADEALAIPALVSGA

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=113, Percent_Identity=39.8230088495575, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 16432; Mature: 16432

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIVAGKLHGIHVTEANLDYHGSITLDPDHCEEAGILPMEFVEIWNKNSGARISTYVIL
CCCEECCCCCEEEEEECCCCCCCEEEECHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
GERGSRCCILNGAAARTCQPGDQIIVCNSIYLDEAHITSLKPRIVTFDQDNNILDRLSYS
CCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHEEEE
VDLDPDGRYCFSILDEADEALAIPALVSGA
EEECCCCCEEHEECCCCCCEEECCEEECCC
>Mature Secondary Structure
MRKIVAGKLHGIHVTEANLDYHGSITLDPDHCEEAGILPMEFVEIWNKNSGARISTYVIL
CCCEECCCCCEEEEEECCCCCCCEEEECHHCCCCCCCCHHHHHHHHCCCCCCEEEEEEEE
GERGSRCCILNGAAARTCQPGDQIIVCNSIYLDEAHITSLKPRIVTFDQDNNILDRLSYS
CCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCHHHHEEEE
VDLDPDGRYCFSILDEADEALAIPALVSGA
EEECCCCCEEHEECCCCCCEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968 [H]